RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 LEMD3Q9Y2U8 911 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 CD2APQ9Y5K6 639 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 KIAA1551Q9HCM1 1747 aa8.62□□□□□ -1.03
R3HDM1-210ENST00000443537 DOCK2Q92608 1830 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 PDS5AQ29RF7 1337 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 CHD4Q14839 1912 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 HIP1O00291 1037 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 GHRHP01286 108 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 ATP5JP18859 108 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 EIF2AK2P19525 551 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 FGFR2P21802 821 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 IRS1P35568 1242 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 KCNJ4P48050 445 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 GPLD1P80108 840 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 PSMD2Q13200 908 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 R3HDM1Q15032 1099 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 CAVIN4Q5BKX8 364 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 GORABQ5T7V8 394 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 MSL1Q68DK7 614 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 C15orf52Q6ZUT6 534 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 GALNT12Q8IXK2 581 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 SP8Q8IXZ3 490 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 GOLGA6L1Q8N7Z2 621 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 TRPM4Q8TD43 1214 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 EPS8L3Q8TE67 593 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 EAF2Q96CJ1 260 aaPredicted RBP8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 RBSNQ9H1K0 784 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 SPON1Q9HCB6 807 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 SEC31BQ9NQW1 1179 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 GNL3LQ9NVN8 582 aaKnown RBP8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 PARP2Q9UGN5 583 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 MINPP1Q9UNW1 487 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 ATP6V0A2Q9Y487 856 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 SLX4Q8IY92 1834 aa8.61□□□□□ -1.03
R3HDM1-210ENST00000443537 J3QW42 95 aa8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 SMARCA5O60264 1052 aaPredicted RBP8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 CPB1P15086 417 aa8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 ADH7P40394 386 aa8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 KRT76Q01546 638 aa8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 TTF1Q15361 905 aaPredicted RBP8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 COL13A1Q5TAT6 717 aaPredicted RBP8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 FAM35AQ86V20 835 aa8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 C2CD5Q86YS7 1000 aa8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 MICALL1Q8N3F8 863 aa8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 CELF1Q92879 486 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 ZNF775Q96BV0 537 aaPredicted RBP8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 EVI5LQ96CN4 794 aa8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 PUS3Q9BZE2 481 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 VPS33BQ9H267 617 aa8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 KLF15Q9UIH9 416 aa8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 DBNLQ9UJU6 430 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 GDF2Q9UK05 429 aaPredicted RBP8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 MED23Q9ULK4 1368 aa8.6□□□□□ -1.03
R3HDM1-210ENST00000443537 PSME4Q14997 1843 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 ZNF804BA4D1E1 1349 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 MAST2Q6P0Q8 1798 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 EPB41L2O43491 1005 aaKnown RBP8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 CDC45O75419 566 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 ALAS2P22557 587 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 GMPRP36959 345 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 PI16Q6UXB8 463 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 FCHSD1Q86WN1 690 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 SUPT20HQ8NEM7 779 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 PI4K2BQ8TCG2 481 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 TNFRSF25Q93038 417 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 FAM161BQ96MY7 647 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 NEUROD6Q96NK8 337 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 EYA3Q99504 573 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 HAUS7Q99871 368 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 LATS2Q9NRM7 1088 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 SALL4Q9UJQ4 1053 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 SLC6A14Q9UN76 642 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 FER1L6Q2WGJ9 1857 aa8.59□□□□□ -1.03
R3HDM1-210ENST00000443537 RAD50Q92878 1312 aa8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 ZBTB42B2RXF5 422 aa8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 ZBTB7AO95365 584 aa8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 HOXD8P13378 290 aaPredicted RBP8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 TTC39AQ5SRH9 613 aa8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 ZNF804AQ7Z570 1209 aa8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 VPS37DQ86XT2 251 aa8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 RTKN2Q8IZC4 609 aa8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 ZGPATQ8N5A5 531 aaKnown RBP8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 TTLL6Q8N841 843 aa8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 RUFY2Q8WXA3 655 aa8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 DBNDD2Q9BQY9 259 aa8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 EHD4Q9H223 541 aa8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 UPF2Q9HAU5 1272 aaKnown RBP8.58□□□□□ -1.04
R3HDM1-210ENST00000443537 COL4A1P02462 1669 aa8.57□□□□□ -1.04
R3HDM1-210ENST00000443537 ELOA3CA0A087WX78 387 aaPredicted RBP8.57□□□□□ -1.04
R3HDM1-210ENST00000443537 ELOA3DA6NLF2 546 aaPredicted RBP8.57□□□□□ -1.04
R3HDM1-210ENST00000443537 KIF4AO95239 1232 aa8.57□□□□□ -1.04
R3HDM1-210ENST00000443537 ZFYP08048 801 aaPredicted RBP8.57□□□□□ -1.04
R3HDM1-210ENST00000443537 GNA15P30679 374 aa8.57□□□□□ -1.04
R3HDM1-210ENST00000443537 TIMM10P62072 90 aa8.57□□□□□ -1.04
R3HDM1-210ENST00000443537 ELOA3BQ3SY89 546 aa8.57□□□□□ -1.04
R3HDM1-210ENST00000443537 ZSCAN25Q6NSZ9 544 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms