RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 CEP57L1Q8IYX8 460 aa14.98□□□□□ -0.01
ACTN4-204ENST00000440400 ANKRD7Q92527 254 aa14.98□□□□□ -0.01
ACTN4-204ENST00000440400 SDF4Q9BRK5 362 aa14.98□□□□□ -0.01
ACTN4-204ENST00000440400 JMJD4Q9H9V9 463 aa14.98□□□□□ -0.01
ACTN4-204ENST00000440400 A0A087X0B3 334 aa14.98□□□□□ -0.01
ACTN4-204ENST00000440400 GOLGA8HP0CJ92 632 aa14.98□□□□□ -0.01
ACTN4-204ENST00000440400 NCAPHQ15003 741 aa14.98□□□□□ -0.01
ACTN4-204ENST00000440400 FAM151AQ8WW52 585 aa14.98□□□□□ -0.01
ACTN4-204ENST00000440400 PNMA6FA0A0J9YX94 578 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 ZNF75DP51815 510 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 PTGDRQ13258 359 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 FAM83AQ86UY5 434 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 MRFAP1L1Q96HT8 127 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 PAPPA2Q9BXP8 1791 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 GNA11P29992 359 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 ZNF280AP59817 542 aaPredicted RBP14.97□□□□□ -0.01
ACTN4-204ENST00000440400 DPCR1Q3MIW9 517 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 BTNL9Q6UXG8 535 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 PIGSQ96S52 555 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 ZNF70Q9UC06 446 aaPredicted RBP14.97□□□□□ -0.01
ACTN4-204ENST00000440400 CLIP2Q9UDT6 1046 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 CD2APQ9Y5K6 639 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 MORC3Q14149 939 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 CERKLQ49MI3 558 aaPredicted RBP14.97□□□□□ -0.01
ACTN4-204ENST00000440400 HEATR3Q7Z4Q2 680 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 FEZ1Q99689 392 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 HSD3B7Q9H2F3 369 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 TDRD3Q9H7E2 651 aaKnown RBP14.97□□□□□ -0.01
ACTN4-204ENST00000440400 C6orf50Q9HD87 102 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 PYCARDQ9ULZ3 195 aa14.97□□□□□ -0.01
ACTN4-204ENST00000440400 EDIL3O43854 480 aa14.96□□□□□ -0.01
ACTN4-204ENST00000440400 PPP1R11O60927 126 aaPredicted RBP14.96□□□□□ -0.01
ACTN4-204ENST00000440400 TPM3P06753 285 aa14.96□□□□□ -0.01
ACTN4-204ENST00000440400 LRRC47Q8N1G4 583 aaKnown RBP14.96□□□□□ -0.01
ACTN4-204ENST00000440400 RIC8AQ9NPQ8 531 aa14.96□□□□□ -0.01
ACTN4-204ENST00000440400 HOOK1Q9UJC3 728 aaKnown RBP14.96□□□□□ -0.01
ACTN4-204ENST00000440400 RBBP6Q7Z6E9 1792 aaKnown RBP14.96□□□□□ -0.01
ACTN4-204ENST00000440400 CCDC66A2RUB6 948 aa14.96□□□□□ -0.01
ACTN4-204ENST00000440400 NCBP1Q09161 790 aaKnown RBP14.96□□□□□ -0.01
ACTN4-204ENST00000440400 SEMA3FQ13275 785 aa14.96□□□□□ -0.01
ACTN4-204ENST00000440400 POSTNQ15063 836 aa14.96□□□□□ -0.01
ACTN4-204ENST00000440400 ZNF174Q15697 407 aa14.96□□□□□ -0.01
ACTN4-204ENST00000440400 PDXDC2PQ6P474 469 aa14.96□□□□□ -0.01
ACTN4-204ENST00000440400 ADGRF4Q8IZF3 695 aa14.96□□□□□ -0.01
ACTN4-204ENST00000440400 ZNF277Q9NRM2 450 aaPredicted RBP14.96□□□□□ -0.01
ACTN4-204ENST00000440400 ZNF219Q9P2Y4 722 aaPredicted RBP14.96□□□□□ -0.01
ACTN4-204ENST00000440400 SEC63Q9UGP8 760 aaKnown RBP14.96□□□□□ -0.01
ACTN4-204ENST00000440400 HDAC9Q9UKV0 1011 aa14.96□□□□□ -0.01
ACTN4-204ENST00000440400 RRP1BQ14684 758 aaKnown RBP14.95□□□□□ -0.02
ACTN4-204ENST00000440400 USP49Q70CQ1 688 aa14.95□□□□□ -0.02
ACTN4-204ENST00000440400 SPC24Q8NBT2 197 aa14.95□□□□□ -0.02
ACTN4-204ENST00000440400 CNNM3Q8NE01 707 aa14.95□□□□□ -0.02
ACTN4-204ENST00000440400 SYMPKQ92797 1274 aaKnown RBP14.95□□□□□ -0.02
ACTN4-204ENST00000440400 BMP6P22004 513 aa14.95□□□□□ -0.02
ACTN4-204ENST00000440400 CACNB3P54284 484 aa14.95□□□□□ -0.02
ACTN4-204ENST00000440400 PNOCQ13519 176 aa14.95□□□□□ -0.02
ACTN4-204ENST00000440400 PARP14Q460N5 1801 aa14.95□□□□□ -0.02
ACTN4-204ENST00000440400 LARGE2Q8N3Y3 721 aa14.95□□□□□ -0.02
ACTN4-204ENST00000440400 SERTAD1Q9UHV2 236 aa14.95□□□□□ -0.02
ACTN4-204ENST00000440400 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
ACTN4-204ENST00000440400 SMCO2A6NFE2 343 aa14.95□□□□□ -0.02
ACTN4-204ENST00000440400 EEF2P13639 858 aaKnown RBP14.95□□□□□ -0.02
ACTN4-204ENST00000440400 DOCK1Q14185 1865 aa14.95□□□□□ -0.02
ACTN4-204ENST00000440400 ZBTB5O15062 677 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 POLR2DO15514 142 aaKnown RBP14.94□□□□□ -0.02
ACTN4-204ENST00000440400 NAPAP54920 295 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 JAG1P78504 1218 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 GABPB1Q06547 395 aaPredicted RBP14.94□□□□□ -0.02
ACTN4-204ENST00000440400 TERF2Q15554 542 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 DALRD3Q5D0E6 543 aaKnown RBP14.94□□□□□ -0.02
ACTN4-204ENST00000440400 CLEC10AQ8IUN9 316 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 NIM1KQ8IY84 436 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 MAN1B1Q9UKM7 699 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 FRMPD2Q68DX3 1309 aaPredicted RBP14.94□□□□□ -0.02
ACTN4-204ENST00000440400 NFKBIEO00221 500 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 RPS12P25398 132 aaKnown RBP14.94□□□□□ -0.02
ACTN4-204ENST00000440400 DPYDQ12882 1025 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 CCSER1Q9C0I3 900 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 ST7Q9NRC1 585 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 PCDHA5Q9Y5H7 936 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 MYH7BA7E2Y1 1941 aa14.94□□□□□ -0.02
ACTN4-204ENST00000440400 CCDC194A0A1B0GVG4 234 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 PLA2G6O60733 806 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 NONOQ15233 471 aaKnown RBP eCLIP14.93□□□□□ -0.02
ACTN4-204ENST00000440400 AK8Q96MA6 479 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 CPVLQ9H3G5 476 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 PRR29P0C7W0 189 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 ABCB5Q2M3G0 1257 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 PAGE5Q96GU1 130 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 EPSTI1Q96J88 318 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 GLT8D2Q9H1C3 349 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 SPTLC3Q9NUV7 552 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 LOC285556D6RIA3 1793 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 PTGER2P43116 358 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 RBM5P52756 815 aaKnown RBP eCLIP14.93□□□□□ -0.02
ACTN4-204ENST00000440400 CXCL9Q07325 125 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 TCP10Q12799 353 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 MTMR9Q96QG7 549 aa14.93□□□□□ -0.02
ACTN4-204ENST00000440400 BAZ2BQ9UIF8 2168 aaKnown RBP14.92□□□□□ -0.02
ACTN4-204ENST00000440400 PHIPQ8WWQ0 1821 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 5.8 ms