RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 ZMYM6O95789 1325 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 TSPY2A6NKD2 308 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 FGAP02671 866 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 PCP11498 1178 aaKnown RBP13.58□□□□□ -0.24
IRF1-204ENST00000439555 ADCYAP1R1P41586 468 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 NT5C2P49902 561 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 TLE2Q04725 743 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 LRRC41Q15345 812 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 VPS53Q5VIR6 699 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 SNRNP48Q6IEG0 339 aaKnown RBP13.58□□□□□ -0.24
IRF1-204ENST00000439555 MAMDC4Q6UXC1 1216 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 ZNF467Q7Z7K2 595 aaPredicted RBP13.58□□□□□ -0.24
IRF1-204ENST00000439555 LRRC47Q8N1G4 583 aaKnown RBP13.58□□□□□ -0.24
IRF1-204ENST00000439555 USP38Q8NB14 1042 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 CHST13Q8NET6 341 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 KIFC2Q96AC6 838 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 FAM227BQ96M60 508 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 TOX2Q96NM4 488 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 ASB2Q96Q27 587 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 ZNF576Q9H609 170 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 IL17RBQ9NRM6 502 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 RIPK3Q9Y572 518 aa13.58□□□□□ -0.24
IRF1-204ENST00000439555 CTDP1Q9Y5B0 961 aaPredicted RBP13.58□□□□□ -0.24
IRF1-204ENST00000439555 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.24
IRF1-204ENST00000439555 TCF20Q9UGU0 1960 aaKnown RBP13.58□□□□□ -0.24
IRF1-204ENST00000439555 A0A0D9SFI3 127 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 IGHDP01880 384 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 PGK2P07205 417 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 CLTBP09497 229 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 HSPD1P10809 573 aaKnown RBP13.57□□□□□ -0.24
IRF1-204ENST00000439555 DNAJB2P25686 324 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
IRF1-204ENST00000439555 SLC1A4P43007 532 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 STAT2P52630 851 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 MFAP1P55081 439 aaKnown RBP13.57□□□□□ -0.24
IRF1-204ENST00000439555 CTDSPL2Q05D32 466 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 RCSD1Q6JBY9 416 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 PLEKHM2Q8IWE5 1019 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 STAG1Q8WVM7 1258 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 DDX11Q96FC9 970 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 TCP11L1Q9NUJ3 509 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 STX8Q9UNK0 236 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 PHF24Q9UPV7 400 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 SYNGAP1Q96PV0 1343 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 PARP14Q460N5 1801 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 GBF1Q92538 1859 aa13.57□□□□□ -0.24
IRF1-204ENST00000439555 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
IRF1-204ENST00000439555 TMEM232C9JQI7 657 aa13.56□□□□□ -0.24
IRF1-204ENST00000439555 RARBP10826 455 aa13.56□□□□□ -0.24
IRF1-204ENST00000439555 RAG1P15918 1043 aa13.56□□□□□ -0.24
IRF1-204ENST00000439555 ITGB8P26012 769 aa13.56□□□□□ -0.24
IRF1-204ENST00000439555 MRPS5P82675 430 aaKnown RBP13.56□□□□□ -0.24
IRF1-204ENST00000439555 PRAMEF19Q5SWL8 479 aa13.56□□□□□ -0.24
IRF1-204ENST00000439555 CPXCR1Q8N123 301 aa13.56□□□□□ -0.24
IRF1-204ENST00000439555 EXOC6Q8TAG9 804 aa13.56□□□□□ -0.24
IRF1-204ENST00000439555 GAS2L1Q99501 681 aaPredicted RBP13.56□□□□□ -0.24
IRF1-204ENST00000439555 RAVER2Q9HCJ3 691 aaKnown RBP13.56□□□□□ -0.24
IRF1-204ENST00000439555 CNPY2Q9Y2B0 182 aa13.56□□□□□ -0.24
IRF1-204ENST00000439555 CCDC171Q6TFL3 1326 aa13.56□□□□□ -0.24
IRF1-204ENST00000439555 HIP1O00291 1037 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 RANBP6O60518 1105 aaKnown RBP13.55□□□□□ -0.24
IRF1-204ENST00000439555 ZNF865P0CJ78 1059 aaPredicted RBP13.55□□□□□ -0.24
IRF1-204ENST00000439555 AKR1A1P14550 325 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 SDSP20132 328 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 MCCP23508 829 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 EPHB4P54760 987 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 FPGSQ05932 587 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 NMIQ13287 307 aaPredicted RBP13.55□□□□□ -0.24
IRF1-204ENST00000439555 TKFCQ3LXA3 575 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 B4GALNT3Q6L9W6 998 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 TIFAQ96CG3 184 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 TTC14Q96N46 770 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 INCENPQ9NQS7 918 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 THEGQ9P2T0 379 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 BDP1A6H8Y1 2624 aa13.55□□□□□ -0.24
IRF1-204ENST00000439555 COL11A1P12107 1806 aaPredicted RBP13.55□□□□□ -0.24
IRF1-204ENST00000439555 MYH8P13535 1937 aa13.54□□□□□ -0.24
IRF1-204ENST00000439555 ANKRD33Q7Z3H0 272 aa13.54□□□□□ -0.24
IRF1-204ENST00000439555 RNF180Q86T96 592 aa13.54□□□□□ -0.24
IRF1-204ENST00000439555 ZNF589Q86UQ0 364 aaPredicted RBP13.54□□□□□ -0.24
IRF1-204ENST00000439555 ANKRD35Q8N283 1001 aa13.54□□□□□ -0.24
IRF1-204ENST00000439555 DCAF4Q8WV16 495 aa13.54□□□□□ -0.24
IRF1-204ENST00000439555 TSEN34Q9BSV6 310 aaKnown RBP13.54□□□□□ -0.24
IRF1-204ENST00000439555 C1QTNF1Q9BXJ1 281 aa13.54□□□□□ -0.24
IRF1-204ENST00000439555 RNF41Q9H4P4 317 aaPredicted RBP13.54□□□□□ -0.24
IRF1-204ENST00000439555 XPNPEP3Q9NQH7 507 aa13.54□□□□□ -0.24
IRF1-204ENST00000439555 NMT2O60551 498 aa13.53□□□□□ -0.24
IRF1-204ENST00000439555 SNAI1O95863 264 aaPredicted RBP13.53□□□□□ -0.24
IRF1-204ENST00000439555 TOP1P11387 765 aaKnown RBP13.53□□□□□ -0.24
IRF1-204ENST00000439555 RASIP1Q5U651 963 aa13.53□□□□□ -0.24
IRF1-204ENST00000439555 CCDC174Q6PII3 467 aa13.53□□□□□ -0.24
IRF1-204ENST00000439555 BTNL9Q6UXG8 535 aa13.53□□□□□ -0.24
IRF1-204ENST00000439555 ADAMTS19Q8TE59 1207 aa13.53□□□□□ -0.24
IRF1-204ENST00000439555 FERMT2Q96AC1 680 aa13.53□□□□□ -0.24
IRF1-204ENST00000439555 ABHD16BQ9H3Z7 469 aa13.53□□□□□ -0.24
IRF1-204ENST00000439555 ACAD9Q9H845 621 aa13.53□□□□□ -0.24
IRF1-204ENST00000439555 TMEM39AQ9NV64 488 aa13.53□□□□□ -0.24
IRF1-204ENST00000439555 RAPGEFL1Q9UHV5 662 aa13.53□□□□□ -0.24
IRF1-204ENST00000439555 PNMA2Q9UL42 364 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms