RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 TUBB4AP04350 444 aa19.2■□□□□ 0.66
CTSD-204ENST00000433655 SNHG28P0DPA3 235 aa19.2■□□□□ 0.66
CTSD-204ENST00000433655 PAK1Q13153 545 aa19.2■□□□□ 0.66
CTSD-204ENST00000433655 NONOQ15233 471 aaKnown RBP eCLIP19.2■□□□□ 0.66
CTSD-204ENST00000433655 TOGARAM2Q6ZUX3 1019 aa19.2■□□□□ 0.66
CTSD-204ENST00000433655 AKT1S1Q96B36 256 aa19.2■□□□□ 0.66
CTSD-204ENST00000433655 CCDC94Q9BW85 323 aaPredicted RBP19.2■□□□□ 0.66
CTSD-204ENST00000433655 VAT1LQ9HCJ6 419 aa19.2■□□□□ 0.66
CTSD-204ENST00000433655 RMND1Q9NWS8 449 aa19.2■□□□□ 0.66
CTSD-204ENST00000433655 LIMA1Q9UHB6 759 aaKnown RBP19.2■□□□□ 0.66
CTSD-204ENST00000433655 TTF2Q9UNY4 1162 aaKnown RBP19.2■□□□□ 0.66
CTSD-204ENST00000433655 PHLPP2Q6ZVD8 1323 aa19.19■□□□□ 0.66
CTSD-204ENST00000433655 ESYT2A0FGR8 921 aa19.19■□□□□ 0.66
CTSD-204ENST00000433655 NPR1P16066 1061 aa19.19■□□□□ 0.66
CTSD-204ENST00000433655 PRCPP42785 496 aa19.19■□□□□ 0.66
CTSD-204ENST00000433655 DOK7Q18PE1 504 aa19.19■□□□□ 0.66
CTSD-204ENST00000433655 LRRC47Q8N1G4 583 aaKnown RBP19.19■□□□□ 0.66
CTSD-204ENST00000433655 NELFBQ8WX92 580 aa19.19■□□□□ 0.66
CTSD-204ENST00000433655 CTAGE1Q96RT6 745 aa19.19■□□□□ 0.66
CTSD-204ENST00000433655 KBTBD4Q9NVX7 518 aa19.19■□□□□ 0.66
CTSD-204ENST00000433655 SEC63Q9UGP8 760 aaKnown RBP19.19■□□□□ 0.66
CTSD-204ENST00000433655 MYH4Q9Y623 1939 aa19.19■□□□□ 0.66
CTSD-204ENST00000433655 OR52Z1P0C646 297 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 GNA11P29992 359 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 KRT31Q15323 416 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 LETM2Q2VYF4 491 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 DPP8Q6V1X1 898 aaPredicted RBP19.18■□□□□ 0.66
CTSD-204ENST00000433655 IGSF22Q8N9C0 903 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 ERO1AQ96HE7 468 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 ZC3H12CQ9C0D7 883 aaKnown RBP19.18■□□□□ 0.66
CTSD-204ENST00000433655 LRRC10BA6NIK2 292 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 SLU7O95391 586 aaKnown RBP19.18■□□□□ 0.66
CTSD-204ENST00000433655 UBA7P41226 1012 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 RBL2Q08999 1139 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 NEK8Q86SG6 692 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 PANX2Q96RD6 677 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 PLIN2Q99541 437 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 TMEM260Q9NX78 707 aa19.18■□□□□ 0.66
CTSD-204ENST00000433655 AKR1B15C9JRZ8 316 aaPredicted RBP19.17■□□□□ 0.66
CTSD-204ENST00000433655 ZSCAN12O43309 604 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 EDIL3O43854 480 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 CCNT1O60563 726 aaKnown RBP19.17■□□□□ 0.66
CTSD-204ENST00000433655 SHMT1P34896 483 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 SCNN1DP51172 638 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 KCNB1Q14721 858 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 KMT5BQ4FZB7 885 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 CDC42EP5Q6NZY7 148 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 ADSSL1Q8N142 457 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 NLGN1Q8N2Q7 840 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 LRRN4CLQ8ND94 238 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 USP40Q9NVE5 1235 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 DNAI1Q9UI46 699 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 MAPK8IP1Q9UQF2 711 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 ITIH6Q6UXX5 1313 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 EIF6P56537 245 aaKnown RBP19.17■□□□□ 0.66
CTSD-204ENST00000433655 MTF1Q14872 753 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 ASPRV1Q53RT3 343 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 PPP4R3BQ5MIZ7 849 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 TBCKQ8TEA7 893 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 AK8Q96MA6 479 aa19.17■□□□□ 0.66
CTSD-204ENST00000433655 BIN2Q9UBW5 565 aaPredicted RBP19.17■□□□□ 0.66
CTSD-204ENST00000433655 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.17■□□□□ 0.666e-8■□□□□ 10.2
CTSD-204ENST00000433655 V9GYY5 206 aaPredicted RBP19.17■□□□□ 0.66
CTSD-204ENST00000433655 MYO3BQ8WXR4 1341 aa19.16■□□□□ 0.66
CTSD-204ENST00000433655 PLCG1P19174 1290 aa19.16■□□□□ 0.66
CTSD-204ENST00000433655 CCT6AP40227 531 aaKnown RBP19.16■□□□□ 0.66
CTSD-204ENST00000433655 SOGA3Q5TF21 947 aa19.16■□□□□ 0.66
CTSD-204ENST00000433655 JAKMIP3Q5VZ66 844 aa19.16■□□□□ 0.66
CTSD-204ENST00000433655 APOBEC3HQ6NTF7 200 aaKnown RBP19.16■□□□□ 0.66
CTSD-204ENST00000433655 CABP7Q86V35 215 aa19.16■□□□□ 0.66
CTSD-204ENST00000433655 IRF2BP1Q8IU81 584 aa19.16■□□□□ 0.66
CTSD-204ENST00000433655 REXO1Q8N1G1 1221 aaKnown RBP19.16■□□□□ 0.66
CTSD-204ENST00000433655 SERPINB13Q9UIV8 391 aa19.16■□□□□ 0.66
CTSD-204ENST00000433655 SCN9AQ15858 1988 aa19.16■□□□□ 0.66
CTSD-204ENST00000433655 TRIM49BA6NDI0 452 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 hCG_1984214I3L0E3 225 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 MFAP3LO75121 409 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 GYPCP04921 128 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 MYL1P05976 194 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 COPB1P53618 953 aaKnown RBP19.15■□□□□ 0.66
CTSD-204ENST00000433655 PMS1P54277 932 aaKnown RBP19.15■□□□□ 0.66
CTSD-204ENST00000433655 FILIP1LQ4L180 1135 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 TCP11X2Q5H9J9 407 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 ZNF713Q8N859 430 aaPredicted RBP19.15■□□□□ 0.66
CTSD-204ENST00000433655 RASSF8Q8NHQ8 419 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 COA7Q96BR5 231 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 MMTAG2Q9BU76 263 aaKnown RBP19.15■□□□□ 0.66
CTSD-204ENST00000433655 SOWAHDA6NJG2 315 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 RHOBTB3O94955 611 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 SLURP2P0DP57 97 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 FECHP22830 423 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 HHIPL2Q6UWX4 724 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 POTEDQ86YR6 584 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 DESI2Q9BSY9 194 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 TAB2Q9NYJ8 693 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 SWAP70Q9UH65 585 aa19.15■□□□□ 0.66
CTSD-204ENST00000433655 KCNJ18B7U540 433 aa19.14■□□□□ 0.65
CTSD-204ENST00000433655 TTLL1O95922 423 aa19.14■□□□□ 0.65
CTSD-204ENST00000433655 FXR1P51114 621 aaKnown RBP eCLIP19.14■□□□□ 0.65
CTSD-204ENST00000433655 ZNF543Q08ER8 600 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms