RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 BIN2Q9UBW5 565 aaPredicted RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 PCDHB13Q9Y5F0 798 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 SRPRBQ9Y5M8 271 aaKnown RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 PPP2R3BQ9Y5P8 575 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 NAV1Q8NEY1 1877 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 BCRP11274 1271 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 UBASH3AP57075 661 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 CHMP4BP1P59074 171 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 SURF1Q15526 300 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 SLC9C1Q4G0N8 1177 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 CFAP221Q4G0U5 840 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 MAATS1Q7Z4T9 603 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 NSUN7Q8NE18 718 aaKnown RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 CHURC1Q8WUH1 139 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 FAM20AQ96MK3 541 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 SPAG5Q96R06 1193 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 KIF2CQ99661 725 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 FRMD8P1Q9BZ68 369 aaPredicted RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 PPP1R12CQ9BZL4 782 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 KIF13BQ9NQT8 1826 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 SSU72P8A0A1W2PR75 194 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 CALUO43852 315 aaPredicted RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 SASH1O94885 1247 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 ATP5BP06576 529 aaKnown RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 NPR1P16066 1061 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 PTPREP23469 700 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 PLCB2Q00722 1185 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 PTPN12Q05209 780 aaKnown RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 SV2BQ7L1I2 683 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 IFT20Q8IY31 132 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 ATP6V0A1Q93050 837 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 COA1Q9GZY4 146 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 ALDH3A1P30838 453 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 OAZ1P54368 228 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 ANO6Q4KMQ2 910 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 ALS2CLQ60I27 953 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 TMTC3Q6ZXV5 915 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 FOXP4Q8IVH2 680 aaPredicted RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 ZNF654Q8IZM8 581 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 TRIM62Q9BVG3 475 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 BOLA2Q9H3K6 86 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 MTUS1Q9ULD2 1270 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 GOLGA8QA0A0J9YX86 632 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 GOLGA8OA6NCC3 632 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 TSPY2A6NKD2 308 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 GOLGA8NF8WBI6 632 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 TOMM70O94826 608 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 GGPS1O95749 300 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 IGKV5-2P06315 115 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 COL5A3P25940 1745 aaPredicted RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 ADD2P35612 726 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 PABPC4Q13310 644 aaKnown RBP eCLIP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 TTC38Q5R3I4 469 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 TRIM47Q96LD4 638 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 CEP83Q9Y592 693 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 ROBO1Q9Y6N7 1651 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 LOC102724428A0A0B4J2F2 783 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 RAD21O60216 631 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 MNAT1P51948 309 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 SIK1P57059 783 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 KIF23Q02241 960 aaPredicted RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 MB21D1Q8N884 522 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 AMNQ9BXJ7 453 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 JRKLQ9Y4A0 524 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 GAKO14976 1311 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 GOLGA6CA6NDK9 693 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 GOLGA6BA6NDN3 693 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 CTIFO43310 598 aaKnown RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 GOLGA6DP0CG33 693 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 PDIA3P30101 505 aaKnown RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 TKFCQ3LXA3 575 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 DIS3L2Q8IYB7 885 aaKnown RBP4.18□□□□□ -1.74
SHPRH-205ENST00000433355 FAM71BQ8TC56 605 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 GOLGA6AQ9NYA3 693 aa4.18□□□□□ -1.74
SHPRH-205ENST00000433355 FAM205AQ6ZU69 1335 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 MYPNQ86TC9 1320 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 SNUPNO95149 360 aaKnown RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 PRLRP16471 622 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 ZNF135P52742 658 aaPredicted RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 TRAPPC3LQ5T215 181 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 PPP1R21Q6ZMI0 780 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 OR8K1Q8NGG5 319 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 NAPGQ99747 312 aaPredicted RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 SERPINA10Q9UK55 444 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 DOT1LQ8TEK3 1739 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 SYNGAP1Q96PV0 1343 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 MYL6P60660 151 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 INTS8Q75QN2 995 aaKnown RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 FAM160B2Q86V87 743 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 GRK7Q8WTQ7 553 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 IFT74Q96LB3 600 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 DRC1Q96MC2 740 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 ZHX2Q9Y6X8 837 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 ZC3H4Q9UPT8 1303 aaKnown RBP4.17□□□□□ -1.74
SHPRH-205ENST00000433355 KRT13P13646 458 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 RTP1P59025 263 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 CCDC125Q86Z20 511 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 RHOT2Q8IXI1 618 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 SUCLG2Q96I99 432 aa4.17□□□□□ -1.74
SHPRH-205ENST00000433355 SLC5A4Q9NY91 659 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms