RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 STXBP3O00186 592 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 CALML3P27482 149 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 SLC16A2P36021 539 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 MKRN3Q13064 507 aaKnown RBP20.97■□□□□ 0.95
HMGN1-206ENST00000431390 GNL2Q13823 731 aaKnown RBP20.97■□□□□ 0.95
HMGN1-206ENST00000431390 SYDE2Q5VT97 1194 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 HEATR3Q7Z4Q2 680 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 CSADQ9Y600 493 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 ZBTB5O15062 677 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 WDR46O15213 610 aaKnown RBP20.97■□□□□ 0.95
HMGN1-206ENST00000431390 STAT2P52630 851 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 VGLL4Q14135 290 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 ZYXQ15942 572 aaKnown RBP20.97■□□□□ 0.95
HMGN1-206ENST00000431390 FAM83BQ5T0W9 1011 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 GALNT17Q6IS24 598 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 GPKOWQ92917 476 aaPredicted RBP eCLIP20.97■□□□□ 0.952e-6■■■■□ 20.4
HMGN1-206ENST00000431390 CHAMP1Q96JM3 812 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 SNCAIPQ9Y6H5 919 aa20.97■□□□□ 0.95
HMGN1-206ENST00000431390 C19orf81C9J6K1 198 aa20.96■□□□□ 0.95
HMGN1-206ENST00000431390 KRT2P35908 639 aa20.96■□□□□ 0.95
HMGN1-206ENST00000431390 BACE1P56817 501 aa20.96■□□□□ 0.95
HMGN1-206ENST00000431390 NLRP5P59047 1200 aa20.96■□□□□ 0.95
HMGN1-206ENST00000431390 SPP2Q13103 211 aa20.96■□□□□ 0.95
HMGN1-206ENST00000431390 CSPP1Q1MSJ5 1256 aa20.96■□□□□ 0.95
HMGN1-206ENST00000431390 FAM173BQ6P4H8 233 aa20.96■□□□□ 0.95
HMGN1-206ENST00000431390 FAM160B2Q86V87 743 aa20.96■□□□□ 0.95
HMGN1-206ENST00000431390 ANKRD13AQ8IZ07 590 aa20.96■□□□□ 0.95
HMGN1-206ENST00000431390 CHURC1Q8WUH1 139 aa20.96■□□□□ 0.95
HMGN1-206ENST00000431390 ZNF396Q96N95 335 aaPredicted RBP20.96■□□□□ 0.95
HMGN1-206ENST00000431390 ZHX2Q9Y6X8 837 aa20.96■□□□□ 0.95
HMGN1-206ENST00000431390 BTBD18B2RXH4 712 aa20.95■□□□□ 0.94
HMGN1-206ENST00000431390 IKQ13123 557 aaPredicted RBP20.95■□□□□ 0.94
HMGN1-206ENST00000431390 MTMR2Q13614 643 aa20.95■□□□□ 0.94
HMGN1-206ENST00000431390 NPY5RQ15761 445 aa20.95■□□□□ 0.94
HMGN1-206ENST00000431390 PKN2Q16513 984 aaKnown RBP20.95■□□□□ 0.94
HMGN1-206ENST00000431390 MYSM1Q5VVJ2 828 aa20.95■□□□□ 0.94
HMGN1-206ENST00000431390 PPP1R18Q6NYC8 613 aa20.95■□□□□ 0.94
HMGN1-206ENST00000431390 ARMC9Q7Z3E5 817 aa20.95■□□□□ 0.94
HMGN1-206ENST00000431390 NOSTRINQ8IVI9 506 aa20.95■□□□□ 0.94
HMGN1-206ENST00000431390 TMEM87AQ8NBN3 555 aa20.95■□□□□ 0.94
HMGN1-206ENST00000431390 FEM1BQ9UK73 627 aa20.95■□□□□ 0.94
HMGN1-206ENST00000431390 CFAP45Q9UL16 551 aa20.95■□□□□ 0.94
HMGN1-206ENST00000431390 CNPY2Q9Y2B0 182 aa20.95■□□□□ 0.94
HMGN1-206ENST00000431390 ESYT2A0FGR8 921 aa20.94■□□□□ 0.94
HMGN1-206ENST00000431390 PRPF38BQ5VTL8 546 aaKnown RBP20.94■□□□□ 0.94
HMGN1-206ENST00000431390 TYW1BQ6NUM6 668 aa20.94■□□□□ 0.94
HMGN1-206ENST00000431390 DAGLBQ8NCG7 672 aa20.94■□□□□ 0.94
HMGN1-206ENST00000431390 C12orf42Q96LP6 360 aa20.94■□□□□ 0.94
HMGN1-206ENST00000431390 SCAND2PQ9GZW5 306 aaPredicted RBP20.94■□□□□ 0.94
HMGN1-206ENST00000431390 AFG3L2Q9Y4W6 797 aa20.94■□□□□ 0.94
HMGN1-206ENST00000431390 GPR25O00155 361 aa20.93■□□□□ 0.94
HMGN1-206ENST00000431390 NCLP19338 710 aaKnown RBP20.93■□□□□ 0.94
HMGN1-206ENST00000431390 TM4SF4P48230 202 aa20.93■□□□□ 0.94
HMGN1-206ENST00000431390 NAPAP54920 295 aa20.93■□□□□ 0.94
HMGN1-206ENST00000431390 CDC37Q16543 378 aaPredicted RBP20.93■□□□□ 0.94
HMGN1-206ENST00000431390 ZMYND12Q9H0C1 365 aa20.93■□□□□ 0.94
HMGN1-206ENST00000431390 EMILIN3Q9NT22 766 aa20.93■□□□□ 0.94
HMGN1-206ENST00000431390 PRR12Q9ULL5 1215 aa20.93■□□□□ 0.94
HMGN1-206ENST00000431390 PCDHA4Q9UN74 947 aa20.93■□□□□ 0.94
HMGN1-206ENST00000431390 PTPRFP10586 1907 aa20.93■□□□□ 0.94
HMGN1-206ENST00000431390 UNCXA6NJT0 531 aa20.93■□□□□ 0.94
HMGN1-206ENST00000431390 QRICH1Q2TAL8 776 aa20.93■□□□□ 0.94
HMGN1-206ENST00000431390 OXER1Q8TDS5 423 aa20.93■□□□□ 0.94
HMGN1-206ENST00000431390 TRIM75PA6NK02 468 aa20.92■□□□□ 0.94
HMGN1-206ENST00000431390 GNA11P29992 359 aa20.92■□□□□ 0.94
HMGN1-206ENST00000431390 NR5A1Q13285 461 aa20.92■□□□□ 0.94
HMGN1-206ENST00000431390 BLIDQ8IZY5 108 aa20.92■□□□□ 0.94
HMGN1-206ENST00000431390 TNFRSF25Q93038 417 aa20.92■□□□□ 0.94
HMGN1-206ENST00000431390 C6orf50Q9HD87 102 aa20.92■□□□□ 0.94
HMGN1-206ENST00000431390 LMBRD1Q9NUN5 540 aa20.92■□□□□ 0.94
HMGN1-206ENST00000431390 PARP14Q460N5 1801 aa20.91■□□□□ 0.94
HMGN1-206ENST00000431390 FIBPO43427 364 aa20.91■□□□□ 0.94
HMGN1-206ENST00000431390 PPP1R11O60927 126 aaPredicted RBP20.91■□□□□ 0.94
HMGN1-206ENST00000431390 VCAM1P19320 739 aa20.91■□□□□ 0.94
HMGN1-206ENST00000431390 PPATQ06203 517 aa20.91■□□□□ 0.94
HMGN1-206ENST00000431390 TRAF1Q13077 416 aa20.91■□□□□ 0.94
HMGN1-206ENST00000431390 SH3D19Q5HYK7 790 aa20.91■□□□□ 0.94
HMGN1-206ENST00000431390 ERO1BQ86YB8 467 aa20.91■□□□□ 0.94
HMGN1-206ENST00000431390 ELP1O95163 1332 aa20.91■□□□□ 0.94
HMGN1-206ENST00000431390 SMCO2A6NFE2 343 aa20.9■□□□□ 0.94
HMGN1-206ENST00000431390 SPDYE5A6NIY4 337 aa20.9■□□□□ 0.94
HMGN1-206ENST00000431390 PRPF40AO75400 957 aaKnown RBP20.9■□□□□ 0.94
HMGN1-206ENST00000431390 SREBF2Q12772 1141 aa20.9■□□□□ 0.94
HMGN1-206ENST00000431390 NBR1Q14596 966 aa20.9■□□□□ 0.94
HMGN1-206ENST00000431390 LDLRAD1Q5T700 205 aa20.9■□□□□ 0.94
HMGN1-206ENST00000431390 BICD2Q8TD16 824 aa20.9■□□□□ 0.94
HMGN1-206ENST00000431390 USP28Q96RU2 1077 aa20.9■□□□□ 0.94
HMGN1-206ENST00000431390 AMNQ9BXJ7 453 aa20.9■□□□□ 0.94
HMGN1-206ENST00000431390 RANBP17Q9H2T7 1088 aaKnown RBP20.9■□□□□ 0.94
HMGN1-206ENST00000431390 GDPD2Q9HCC8 539 aa20.9■□□□□ 0.94
HMGN1-206ENST00000431390 TFIP11Q9UBB9 837 aaKnown RBP20.9■□□□□ 0.94
HMGN1-206ENST00000431390 M0R2N6 131 aa20.89■□□□□ 0.94
HMGN1-206ENST00000431390 NOM1Q5C9Z4 860 aaKnown RBP20.89■□□□□ 0.94
HMGN1-206ENST00000431390 RILPL1Q5EBL4 403 aa20.89■□□□□ 0.94
HMGN1-206ENST00000431390 FBXO46Q6PJ61 603 aaPredicted RBP20.89■□□□□ 0.94
HMGN1-206ENST00000431390 FBXO11Q86XK2 927 aa20.89■□□□□ 0.94
HMGN1-206ENST00000431390 PRPF38AQ8NAV1 312 aaKnown RBP20.89■□□□□ 0.94
HMGN1-206ENST00000431390 COA7Q96BR5 231 aa20.89■□□□□ 0.94
HMGN1-206ENST00000431390 SPATA32Q96LK8 384 aa20.89■□□□□ 0.94
HMGN1-206ENST00000431390 SLF1Q9BQI6 1058 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms