RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.04□□□□□ -0.16
LDB3-205ENST00000429277 BLZF1Q9H2G9 400 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 PANK4Q9NVE7 773 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 USP21Q9UK80 565 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 NOC2LQ9Y3T9 749 aaKnown RBP14.04□□□□□ -0.16
LDB3-205ENST00000429277 KLRF2D3W0D1 207 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 BUB1BO60566 1050 aaPredicted RBP14.04□□□□□ -0.16
LDB3-205ENST00000429277 PHKG2P15735 406 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 ELF2Q15723 593 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 XKR9Q5GH70 373 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 DPY19L2Q6NUT2 758 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 SLAIN2Q9P270 581 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 TESPA1A2RU30 521 aaPredicted RBP14.04□□□□□ -0.16
LDB3-205ENST00000429277 RFX1P22670 979 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 ARHGEF6Q15052 776 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 ME3Q16798 604 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 CCDC38Q502W7 563 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 SPATA1Q5VX52 437 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 MRFAP1L1Q96HT8 127 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 K7ENM7 598 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 CAPN9O14815 690 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 THAP12O43422 761 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 H2AFZP0C0S5 128 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 ICA1Q05084 483 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 PNOCQ13519 176 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 PLCB4Q15147 1175 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 H2AFVQ71UI9 128 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 MAP7D3Q8IWC1 876 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 AK8Q96MA6 479 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 ZMYND15Q9H091 742 aa14.04□□□□□ -0.16
LDB3-205ENST00000429277 IPO11Q9UI26 975 aaKnown RBP14.04□□□□□ -0.16
LDB3-205ENST00000429277 PZPP20742 1482 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 GOLGA8QA0A0J9YX86 632 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 GOLGA8OA6NCC3 632 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 GOLGA8NF8WBI6 632 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 SATB1Q01826 763 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 RPS6KA2Q15349 733 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 PRR16Q569H4 304 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 CEP120Q8N960 986 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 HAUS8Q9BT25 410 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 DDX25Q9UHL0 483 aaKnown RBP14.03□□□□□ -0.16
LDB3-205ENST00000429277 A0A1W2PQ27 194 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 A0A1W2PQ64 194 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 A0A1W2PQD8 194 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 CYP2J2P51589 502 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 PPP2R5DQ14738 602 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 ASPRV1Q53RT3 343 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 FAM26FQ5R3K3 315 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 PHLDB3Q6NSJ2 640 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 KLHL14Q9P2G3 628 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 LEMD3Q9Y2U8 911 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 TMEM2Q9UHN6 1383 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 OATP04181 439 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 CTNNA1P35221 906 aaKnown RBP14.03□□□□□ -0.16
LDB3-205ENST00000429277 ARHGAP4P98171 946 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 NLGN1Q8N2Q7 840 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 ST7Q9NRC1 585 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 RNF8O76064 485 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 TMEM191BP0C7N4 346 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 HSPD1P10809 573 aaKnown RBP14.03□□□□□ -0.16
LDB3-205ENST00000429277 GCFC2P16383 781 aaKnown RBP14.03□□□□□ -0.16
LDB3-205ENST00000429277 SPOUT1Q5T280 376 aaKnown RBP14.03□□□□□ -0.16
LDB3-205ENST00000429277 CTAGE3PQ8IX95 158 aa14.03□□□□□ -0.16
LDB3-205ENST00000429277 KRIT1O00522 736 aa14.02□□□□□ -0.16
LDB3-205ENST00000429277 MYL1P05976 194 aa14.02□□□□□ -0.16
LDB3-205ENST00000429277 ALAS1P13196 640 aa14.02□□□□□ -0.16
LDB3-205ENST00000429277 GAP43P17677 238 aa14.02□□□□□ -0.16
LDB3-205ENST00000429277 GARSP41250 739 aaKnown RBP14.02□□□□□ -0.16
LDB3-205ENST00000429277 MED10Q9BTT4 135 aa14.02□□□□□ -0.16
LDB3-205ENST00000429277 COPRSQ9NQ92 184 aa14.02□□□□□ -0.16
LDB3-205ENST00000429277 RAD51AP2Q09MP3 1159 aa14.02□□□□□ -0.16
LDB3-205ENST00000429277 RINT1Q6NUQ1 792 aa14.02□□□□□ -0.16
LDB3-205ENST00000429277 ARMCX5Q6P1M9 558 aa14.02□□□□□ -0.16
LDB3-205ENST00000429277 PLA2G4DQ86XP0 818 aa14.02□□□□□ -0.16
LDB3-205ENST00000429277 TRMT44Q8IYL2 757 aaKnown RBP14.02□□□□□ -0.16
LDB3-205ENST00000429277 RNF10Q8N5U6 811 aaKnown RBP14.02□□□□□ -0.16
LDB3-205ENST00000429277 RILPQ96NA2 401 aa14.02□□□□□ -0.16
LDB3-205ENST00000429277 APBA3O96018 575 aa14.02□□□□□ -0.17
LDB3-205ENST00000429277 HVCN1Q96D96 273 aa14.02□□□□□ -0.17
LDB3-205ENST00000429277 USP44Q9H0E7 712 aa14.02□□□□□ -0.17
LDB3-205ENST00000429277 MAP3K15Q6ZN16 1313 aa14.02□□□□□ -0.17
LDB3-205ENST00000429277 CCNA1P78396 465 aa14.02□□□□□ -0.17
LDB3-205ENST00000429277 CDKL2Q92772 493 aa14.02□□□□□ -0.17
LDB3-205ENST00000429277 GSDMAQ96QA5 445 aa14.02□□□□□ -0.17
LDB3-205ENST00000429277 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 ATP6V0A1Q93050 837 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 AMNQ9BXJ7 453 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 RGS12O14924 1447 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 WDR17Q8IZU2 1322 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 TECP42680 631 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 BBS5Q8N3I7 341 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 METTL13Q8N6R0 699 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 CCDC68Q9H2F9 335 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 ADCY8P40145 1251 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 SLFN13Q68D06 897 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 RETREG2Q8NC44 543 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 FAM193BQ96PV7 902 aaPredicted RBP14.01□□□□□ -0.17
LDB3-205ENST00000429277 STK17AQ9UEE5 414 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 ARHGEF37A1IGU5 675 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 EFCAB8A8MWE9 144 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms