RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 SYNPO2Q9UMS6 1093 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 PCDHA1Q9Y5I3 950 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 DOCK1Q14185 1865 aa8.12□□□□□ -1.11
CDC7-203ENST00000428239 FCER1AP12319 257 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 NAPAP54920 295 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 TROAPQ12815 778 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 TRAF1Q13077 416 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 FCHSD1Q86WN1 690 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 TRERF1Q96PN7 1200 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 AMNQ9BXJ7 453 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 TXNRD2Q9NNW7 524 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 ZCCHC17Q9NP64 241 aaKnown RBP8.11□□□□□ -1.11
CDC7-203ENST00000428239 SLC45A1Q9Y2W3 748 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 PCNTO95613 3336 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 WDR19Q8NEZ3 1342 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 TESPA1A2RU30 521 aaPredicted RBP8.11□□□□□ -1.11
CDC7-203ENST00000428239 XBP1P17861 261 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 TMEM132BQ14DG7 1078 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 QRICH1Q2TAL8 776 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 SGMS1Q86VZ5 419 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 MMP19Q99542 508 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 MOV10L1Q9BXT6 1211 aaKnown RBP8.11□□□□□ -1.11
CDC7-203ENST00000428239 PORCNQ9H237 461 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 SAGE1Q9NXZ1 904 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 SLC5A4Q9NY91 659 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 BTBD7Q9P203 1132 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 RBPJLQ9UBG7 517 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 FDX1P10109 184 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 CNGA1P29973 690 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 PDIA3P30101 505 aaKnown RBP8.11□□□□□ -1.11
CDC7-203ENST00000428239 MAPK4P31152 587 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 ANP32AP39687 249 aaKnown RBP8.11□□□□□ -1.11
CDC7-203ENST00000428239 RBM25P49756 843 aaKnown RBP8.11□□□□□ -1.11
CDC7-203ENST00000428239 Q3C1V9 767 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 PLEKHH3Q7Z736 793 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 GPKOWQ92917 476 aaPredicted RBP eCLIP8.11□□□□□ -1.11
CDC7-203ENST00000428239 NUDT12Q9BQG2 462 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 ARHGAP39Q9C0H5 1083 aa8.11□□□□□ -1.11
CDC7-203ENST00000428239 FOCADQ5VW36 1801 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 POTEB2H3BUK9 544 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 LACTBP83111 547 aaPredicted RBP8.1□□□□□ -1.11
CDC7-203ENST00000428239 MOGSQ13724 837 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 TOB2Q14106 344 aaPredicted RBP8.1□□□□□ -1.11
CDC7-203ENST00000428239 LBX2Q6XYB7 198 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 SMARCC2Q8TAQ2 1214 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 ANKS1AQ92625 1134 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 ACAD9Q9H845 621 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 FBXO40Q9UH90 709 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 MAD2L2Q9UI95 211 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 TPCN1Q9ULQ1 816 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 LAMB1P07942 1786 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 ZBTB5O15062 677 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 SLC25A27O95847 323 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 PGK2P07205 417 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 KCNB2Q92953 911 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 ZSCAN31Q96LW9 406 aaPredicted RBP8.1□□□□□ -1.11
CDC7-203ENST00000428239 ORC3Q9UBD5 711 aaPredicted RBP8.1□□□□□ -1.11
CDC7-203ENST00000428239 MRPL11Q9Y3B7 192 aaKnown RBP8.1□□□□□ -1.11
CDC7-203ENST00000428239 KIF3AQ9Y496 699 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 MYPNQ86TC9 1320 aa8.1□□□□□ -1.11
CDC7-203ENST00000428239 OTOFQ9HC10 1997 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 HSPA8P11142 646 aaKnown RBP8.09□□□□□ -1.11
CDC7-203ENST00000428239 MCM2P49736 904 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 NLRP5P59047 1200 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 BECN1Q14457 450 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 TMTC3Q6ZXV5 915 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 SRBD1Q8N5C6 995 aaKnown RBP8.09□□□□□ -1.11
CDC7-203ENST00000428239 JMYQ8N9B5 988 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 JMJD4Q9H9V9 463 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 SLC38A10Q9HBR0 1119 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 SMC3Q9UQE7 1217 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 SIPA1L1O43166 1804 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 BAZ2BQ9UIF8 2168 aaKnown RBP8.09□□□□□ -1.11
CDC7-203ENST00000428239 PALM3A6NDB9 673 aaPredicted RBP8.09□□□□□ -1.11
CDC7-203ENST00000428239 CDC27P30260 824 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 COPB2P35606 906 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 FLT3LGP49771 235 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 MCTP1Q6DN14 999 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 C17orf99Q6UX52 265 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 GPR142Q7Z601 462 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 NBPF11Q86T75 865 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 ZNF274Q96GC6 653 aaPredicted RBP8.09□□□□□ -1.11
CDC7-203ENST00000428239 MROH8Q9H579 483 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 PNMA2Q9UL42 364 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 PNMA6FA0A0J9YX94 578 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 H3BQV1 296 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 ICAM1P05362 532 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 PRKCZQ05513 592 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 PPP2R5BQ15173 497 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 ME3Q16798 604 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 SLC9C1Q4G0N8 1177 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 IFFO2Q5TF58 517 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 RNF207Q6ZRF8 634 aa8.09□□□□□ -1.11
CDC7-203ENST00000428239 CCDC12Q8WUD4 166 aaPredicted RBP8.09□□□□□ -1.11
CDC7-203ENST00000428239 MPHOSPH6Q99547 160 aaKnown RBP8.09□□□□□ -1.11
CDC7-203ENST00000428239 SH2B1Q9NRF2 756 aaPredicted RBP8.09□□□□□ -1.11
CDC7-203ENST00000428239 ADORA2AP29274 412 aa8.08□□□□□ -1.12
CDC7-203ENST00000428239 HOXA13P31271 388 aaPredicted RBP8.08□□□□□ -1.12
CDC7-203ENST00000428239 GUCY1B3Q02153 619 aa8.08□□□□□ -1.12
CDC7-203ENST00000428239 EEPD1Q7L9B9 569 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms