RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 HOXA7P31268 230 aaPredicted RBP8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 USP14P54578 494 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 HMGCS2P54868 508 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ATP2B2Q01814 1243 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 GUCA2AQ02747 115 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 KLRC3Q07444 240 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CCL15Q16663 113 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TREML2Q5T2D2 321 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 BLOC1S2Q6QNY1 142 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 USP17L2Q6R6M4 530 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 RNF19BQ6ZMZ0 732 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 RUFY3Q7L099 469 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 FAM43AQ8N2R8 423 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 GMCL1P1Q8NEA9 526 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 THAP11Q96EK4 314 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 UBAC1Q9BSL1 405 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 LRRC2Q9BYS8 371 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ALDH8A1Q9H2A2 487 aaPredicted RBP8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 GPCPD1Q9NPB8 672 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 PRDM9Q9NQV7 894 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 STX8Q9UNK0 236 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 THSD7BQ9C0I4 1608 aa8.29□□□□□ -1.08
CHCHD3P1-201ENST00000425516 NDUFB10O96000 172 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SNHG28P0DPA3 235 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 VCAM1P19320 739 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 EVCP57679 992 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SREBF2Q12772 1141 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TROAPQ12815 778 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 GRM1Q13255 1194 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TOB2Q14106 344 aaPredicted RBP8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 WTAPQ15007 396 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ZYXQ15942 572 aaKnown RBP8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TMEM67Q5HYA8 995 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 PLA2G2CQ5R387 149 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 IFIT1BQ5T764 474 aaKnown RBP8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 FASTKD5Q7L8L6 764 aaKnown RBP8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ANKRD23Q86SG2 305 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SGMS1Q86VZ5 419 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 LRRC47Q8N1G4 583 aaKnown RBP8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TMTC2Q8N394 836 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 JMYQ8N9B5 988 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 PNMA1Q8ND90 353 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 LPAR1Q92633 364 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 GMCL1Q96IK5 515 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TCEANC2Q96MN5 208 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 UPF3BQ9BZI7 483 aaKnown RBP8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 PRKD2Q9BZL6 878 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SH2D4AQ9H788 454 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 GOPCQ9HD26 462 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 ZCCHC17Q9NP64 241 aaKnown RBP8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 AGTPBP1Q9UPW5 1226 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SLC45A1Q9Y2W3 748 aa8.28□□□□□ -1.08
CHCHD3P1-201ENST00000425516 LOC285556D6RIA3 1793 aa8.27□□□□□ -1.08
CHCHD3P1-201ENST00000425516 WDR46O15213 610 aaKnown RBP8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 RGS20O76081 388 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 ADH1BP00325 375 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 PDHBP11177 359 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 SART3Q15020 963 aaKnown RBP8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 SLFN13Q68D06 897 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 GADL1Q6ZQY3 521 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 CATSPERGQ6ZRH7 1159 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 Q6ZUG5 572 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 RASGRP2Q7LDG7 609 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 SPICE1Q8N0Z3 855 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 MAP3K14Q99558 947 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 FEZ1Q99689 392 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 CFHR5Q9BXR6 569 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 RPAP3Q9H6T3 665 aaPredicted RBP8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 UPF2Q9HAU5 1272 aaKnown RBP8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 TMOD4Q9NZQ9 345 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 BRPF3Q9ULD4 1205 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 CYP46A1Q9Y6A2 500 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 MYH4Q9Y623 1939 aa8.27□□□□□ -1.09
CHCHD3P1-201ENST00000425516 ERICH2A1L162 156 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 PALM3A6NDB9 673 aaPredicted RBP8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 USP17L15C9J2P7 530 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 USP17L13C9JLJ4 530 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 USP17L11C9JVI0 530 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 USP17L18D6R9N7 530 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 USP17L22D6RA61 530 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 USP17L17D6RBQ6 530 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 USP17L19D6RCP7 530 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 USP17L20D6RJB6 530 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 PDHXO00330 501 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 TRIM66O15016 1216 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 PLA2G6O60733 806 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 NR1I2O75469 434 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 BMP3P12645 472 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 USP17L24Q0WX57 530 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 FAM83BQ5T0W9 1011 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 APOA5Q6Q788 366 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 BTNL9Q6UXG8 535 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 LBX2Q6XYB7 198 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 ZNF654Q8IZM8 581 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 FAM160A2Q8N612 972 aaPredicted RBP8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 DCAF4Q8WV16 495 aa8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 NUP88Q99567 741 aaPredicted RBP8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 P2RX7Q99572 595 aaKnown RBP8.26□□□□□ -1.09
CHCHD3P1-201ENST00000425516 ASCC2Q9H1I8 757 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms