RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 ZBTB5O15062 677 aa17.17■□□□□ 0.34
CALD1-206ENST00000424922 ADAMTS3O15072 1205 aa17.17■□□□□ 0.34
CALD1-206ENST00000424922 PPP1R12BO60237 982 aaPredicted RBP17.17■□□□□ 0.34
CALD1-206ENST00000424922 CALML3P27482 149 aa17.17■□□□□ 0.34
CALD1-206ENST00000424922 BICD2Q8TD16 824 aa17.17■□□□□ 0.34
CALD1-206ENST00000424922 MTMR8Q96EF0 704 aa17.17■□□□□ 0.34
CALD1-206ENST00000424922 POTEIP0CG38 1075 aa17.16■□□□□ 0.34
CALD1-206ENST00000424922 POTEJP0CG39 1038 aa17.16■□□□□ 0.34
CALD1-206ENST00000424922 SPP2Q13103 211 aa17.16■□□□□ 0.34
CALD1-206ENST00000424922 SYDE2Q5VT97 1194 aa17.16■□□□□ 0.34
CALD1-206ENST00000424922 COA7Q96BR5 231 aa17.16■□□□□ 0.34
CALD1-206ENST00000424922 KIAA1683Q9H0B3 1180 aa17.16■□□□□ 0.34
CALD1-206ENST00000424922 PCDHA4Q9UN74 947 aa17.16■□□□□ 0.34
CALD1-206ENST00000424922 CLIC4Q9Y696 253 aa17.16■□□□□ 0.34
CALD1-206ENST00000424922 PPP1R11O60927 126 aaPredicted RBP17.15■□□□□ 0.34
CALD1-206ENST00000424922 STAT2P52630 851 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 TYRO3Q06418 890 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 DGKZQ13574 1117 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 MTMR2Q13614 643 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 CDC37Q16543 378 aaPredicted RBP17.15■□□□□ 0.34
CALD1-206ENST00000424922 BTNL9Q6UXG8 535 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 BLIDQ8IZY5 108 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 FAM200AQ8TCP9 573 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 CCDC12Q8WUD4 166 aaPredicted RBP17.15■□□□□ 0.34
CALD1-206ENST00000424922 RRAGCQ9HB90 399 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 RTEL1Q9NZ71 1219 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 USP25Q9UHP3 1055 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 ZHX2Q9Y6X8 837 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 FAM205CA6NFA0 338 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 hCG_1984214I3L0E3 225 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 NF2P35240 595 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 SNAP25P60880 206 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 QRICH1Q2TAL8 776 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 EARS2Q5JPH6 523 aaKnown RBP17.15■□□□□ 0.34
CALD1-206ENST00000424922 NOL9Q5SY16 702 aaKnown RBP17.15■□□□□ 0.34
CALD1-206ENST00000424922 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.15■□□□□ 0.34
CALD1-206ENST00000424922 ZNF713Q8N859 430 aaPredicted RBP17.15■□□□□ 0.34
CALD1-206ENST00000424922 TNFRSF25Q93038 417 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 ZMYND12Q9H0C1 365 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 AS3MTQ9HBK9 375 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 PTPRFP10586 1907 aa17.15■□□□□ 0.34
CALD1-206ENST00000424922 SMCO2A6NFE2 343 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 CTAGE5O15320 804 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 ADCY5O95622 1261 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 CAVIN2O95810 425 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 MAP3K9P80192 1104 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 NOM1Q5C9Z4 860 aaKnown RBP17.14■□□□□ 0.33
CALD1-206ENST00000424922 FAM177A1Q8N128 213 aaPredicted RBP17.14■□□□□ 0.33
CALD1-206ENST00000424922 ZNF280CQ8ND82 737 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 WDR18Q9BV38 432 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 POLR3EQ9NVU0 708 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 PRR12Q9ULL5 1215 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 MRVI1Q9Y6F6 885 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 TRIM75PA6NK02 468 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 NR1I2O75469 434 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 TOB1P50616 345 aaPredicted RBP17.14■□□□□ 0.33
CALD1-206ENST00000424922 VGLL4Q14135 290 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 PARP14Q460N5 1801 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 ANO1Q5XXA6 986 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 GALNT17Q6IS24 598 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 LPAR1Q92633 364 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 C6orf50Q9HD87 102 aa17.14■□□□□ 0.33
CALD1-206ENST00000424922 OFD1O75665 1012 aa17.13■□□□□ 0.33
CALD1-206ENST00000424922 PTMAP06454 111 aaKnown RBP17.13■□□□□ 0.33
CALD1-206ENST00000424922 IREB2P48200 963 aaKnown RBP17.13■□□□□ 0.33
CALD1-206ENST00000424922 BACE1P56817 501 aa17.13■□□□□ 0.33
CALD1-206ENST00000424922 TTLL12Q14166 644 aaPredicted RBP17.13■□□□□ 0.33
CALD1-206ENST00000424922 RILPL1Q5EBL4 403 aa17.13■□□□□ 0.33
CALD1-206ENST00000424922 MAP1SQ66K74 1059 aaPredicted RBP17.13■□□□□ 0.33
CALD1-206ENST00000424922 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
CALD1-206ENST00000424922 DAGLBQ8NCG7 672 aa17.13■□□□□ 0.33
CALD1-206ENST00000424922 RASGRP4Q8TDF6 673 aa17.13■□□□□ 0.33
CALD1-206ENST00000424922 CHURC1Q8WUH1 139 aa17.13■□□□□ 0.33
CALD1-206ENST00000424922 EMILIN3Q9NT22 766 aa17.13■□□□□ 0.33
CALD1-206ENST00000424922 ATP2B1P20020 1258 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 GNA11P29992 359 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 USP14P54578 494 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 STK38Q15208 465 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 SF3A1Q15459 793 aaKnown RBP17.12■□□□□ 0.33
CALD1-206ENST00000424922 PIK3AP1Q6ZUJ8 805 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 MOB2Q70IA6 237 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 LINC00301Q8NCQ3 95 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 KIFC2Q96AC6 838 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 FBXO28Q9NVF7 368 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 FEM1BQ9UK73 627 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 CSADQ9Y600 493 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 SNCAIPQ9Y6H5 919 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 M0R2N6 131 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 WDR46O15213 610 aaKnown RBP17.12■□□□□ 0.33
CALD1-206ENST00000424922 CAMK4Q16566 473 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 PCDHA6Q9UN73 950 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 PCDHA8Q9Y5H6 950 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 PCDHA1Q9Y5I3 950 aa17.12■□□□□ 0.33
CALD1-206ENST00000424922 ESYT2A0FGR8 921 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 PLA2G6O60733 806 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 YEATS4O95619 227 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
CALD1-206ENST00000424922 FAM160B2Q86V87 743 aa17.11■□□□□ 0.33
CALD1-206ENST00000424922 CCAR1Q8IX12 1150 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms