RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 BAZ2BQ9UIF8 2168 aaKnown RBP20.33■□□□□ 0.85
LINC00271-201ENST00000421378 ZBTB5O15062 677 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 PEX10O60683 326 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 CNMDO75829 334 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 CDKL5O76039 1030 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 BCRP11274 1271 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 IFNAR1P17181 557 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 OAZ1P54368 228 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 ERVK-9P63128 1117 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 ERVK-24P63145 666 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 PLS1Q14651 629 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 CCDC174Q6PII3 467 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 C17orf99Q6UX52 265 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 CPXCR1Q8N123 301 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 GPRC5AQ8NFJ5 357 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 PIBF1Q8WXW3 757 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 PIGSQ96S52 555 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 TEX13BQ9BXU2 312 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 R3HDMLQ9H3Y0 253 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 MORF4L1Q9UBU8 362 aa20.33■□□□□ 0.84
LINC00271-201ENST00000421378 ATP2A1O14983 1001 aa20.32■□□□□ 0.84
LINC00271-201ENST00000421378 ST3GAL1Q11201 340 aa20.32■□□□□ 0.84
LINC00271-201ENST00000421378 QRICH1Q2TAL8 776 aa20.32■□□□□ 0.84
LINC00271-201ENST00000421378 CCDC83Q8IWF9 413 aa20.32■□□□□ 0.84
LINC00271-201ENST00000421378 HSCBQ8IWL3 235 aa20.32■□□□□ 0.84
LINC00271-201ENST00000421378 PHKBQ93100 1093 aa20.32■□□□□ 0.84
LINC00271-201ENST00000421378 SPATC1LQ9H0A9 340 aa20.32■□□□□ 0.84
LINC00271-201ENST00000421378 RAVER2Q9HCJ3 691 aaKnown RBP20.32■□□□□ 0.84
LINC00271-201ENST00000421378 ZNF536O15090 1300 aa20.32■□□□□ 0.84
LINC00271-201ENST00000421378 PPFIA3O75145 1194 aa20.31■□□□□ 0.84
LINC00271-201ENST00000421378 ICAM1P05362 532 aa20.31■□□□□ 0.84
LINC00271-201ENST00000421378 SNRNP48Q6IEG0 339 aaKnown RBP20.31■□□□□ 0.84
LINC00271-201ENST00000421378 TRIM22Q8IYM9 498 aa20.31■□□□□ 0.84
LINC00271-201ENST00000421378 RNF26Q9BY78 433 aaPredicted RBP20.31■□□□□ 0.84
LINC00271-201ENST00000421378 MYH6P13533 1939 aa20.31■□□□□ 0.84
LINC00271-201ENST00000421378 PNMA6FA0A0J9YX94 578 aa20.3■□□□□ 0.84
LINC00271-201ENST00000421378 K7ELQ4 463 aaPredicted RBP20.3■□□□□ 0.84
LINC00271-201ENST00000421378 STAT3P40763 770 aa20.3■□□□□ 0.84
LINC00271-201ENST00000421378 CCNA1P78396 465 aa20.3■□□□□ 0.84
LINC00271-201ENST00000421378 AKAP17AQ02040 695 aaKnown RBP20.3■□□□□ 0.84
LINC00271-201ENST00000421378 SLC26A6Q9BXS9 759 aa20.3■□□□□ 0.84
LINC00271-201ENST00000421378 RBM27Q9P2N5 1060 aaKnown RBP20.3■□□□□ 0.84
LINC00271-201ENST00000421378 PNMA2Q9UL42 364 aa20.3■□□□□ 0.84
LINC00271-201ENST00000421378 CCPG1Q9ULG6 757 aa20.3■□□□□ 0.84
LINC00271-201ENST00000421378 V9GY48 417 aaPredicted RBP20.3■□□□□ 0.84
LINC00271-201ENST00000421378 hCG_1642624A0A1W2PR95 340 aa20.29■□□□□ 0.84
LINC00271-201ENST00000421378 Q3C1V9 767 aa20.29■□□□□ 0.84
LINC00271-201ENST00000421378 AGBL1Q96MI9 1066 aa20.29■□□□□ 0.84
LINC00271-201ENST00000421378 AMNQ9BXJ7 453 aa20.29■□□□□ 0.84
LINC00271-201ENST00000421378 PRPF3O43395 683 aaKnown RBP20.29■□□□□ 0.84
LINC00271-201ENST00000421378 FMNL1O95466 1100 aaPredicted RBP20.29■□□□□ 0.84
LINC00271-201ENST00000421378 CTDNEP1O95476 244 aa20.29■□□□□ 0.84
LINC00271-201ENST00000421378 SLC4A3P48751 1232 aa20.29■□□□□ 0.84
LINC00271-201ENST00000421378 SSRP1Q08945 709 aaKnown RBP20.29■□□□□ 0.84
LINC00271-201ENST00000421378 USH1GQ495M9 461 aa20.29■□□□□ 0.84
LINC00271-201ENST00000421378 FBXO11Q86XK2 927 aa20.29■□□□□ 0.84
LINC00271-201ENST00000421378 RIOX2Q8IUF8 465 aa20.29■□□□□ 0.84
LINC00271-201ENST00000421378 NSUN7Q8NE18 718 aaKnown RBP20.29■□□□□ 0.84
LINC00271-201ENST00000421378 MOV10L1Q9BXT6 1211 aaKnown RBP20.29■□□□□ 0.84
LINC00271-201ENST00000421378 TSKSQ9UJT2 592 aa20.29■□□□□ 0.84
LINC00271-201ENST00000421378 PPP1R11O60927 126 aaPredicted RBP20.28■□□□□ 0.84
LINC00271-201ENST00000421378 LLPHQ9BRT6 129 aaKnown RBP20.28■□□□□ 0.84
LINC00271-201ENST00000421378 PTPDC1A2A3K4 754 aa20.27■□□□□ 0.84
LINC00271-201ENST00000421378 GPR25O00155 361 aa20.27■□□□□ 0.84
LINC00271-201ENST00000421378 SLC25A27O95847 323 aa20.27■□□□□ 0.84
LINC00271-201ENST00000421378 COPB2P35606 906 aa20.27■□□□□ 0.84
LINC00271-201ENST00000421378 TRAF1Q13077 416 aa20.27■□□□□ 0.84
LINC00271-201ENST00000421378 NOM1Q5C9Z4 860 aaKnown RBP20.27■□□□□ 0.84
LINC00271-201ENST00000421378 CCAR1Q8IX12 1150 aaKnown RBP20.27■□□□□ 0.84
LINC00271-201ENST00000421378 PORCNQ9H237 461 aa20.27■□□□□ 0.84
LINC00271-201ENST00000421378 HOMER2Q9NSB8 354 aa20.27■□□□□ 0.84
LINC00271-201ENST00000421378 RIPK3Q9Y572 518 aa20.27■□□□□ 0.84
LINC00271-201ENST00000421378 PCDHA1Q9Y5I3 950 aa20.27■□□□□ 0.84
LINC00271-201ENST00000421378 STK36Q9NRP7 1315 aa20.27■□□□□ 0.84
LINC00271-201ENST00000421378 DEXIO95424 95 aa20.26■□□□□ 0.83
LINC00271-201ENST00000421378 ALAS1P13196 640 aa20.26■□□□□ 0.83
LINC00271-201ENST00000421378 TAL1P17542 331 aaPredicted RBP20.26■□□□□ 0.83
LINC00271-201ENST00000421378 ERCC3P19447 782 aa20.26■□□□□ 0.83
LINC00271-201ENST00000421378 SP3Q02447 781 aa20.26■□□□□ 0.83
LINC00271-201ENST00000421378 PFKFB3Q16875 520 aaPredicted RBP20.26■□□□□ 0.83
LINC00271-201ENST00000421378 HEATR3Q7Z4Q2 680 aa20.26■□□□□ 0.83
LINC00271-201ENST00000421378 NCAPG2Q86XI2 1143 aa20.26■□□□□ 0.83
LINC00271-201ENST00000421378 SHCBP1Q8NEM2 672 aa20.26■□□□□ 0.83
LINC00271-201ENST00000421378 JAK2O60674 1132 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 DTNBO60941 627 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 SCG2P13521 617 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 TKFCQ3LXA3 575 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 WDR78Q5VTH9 848 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 MROH8Q9H579 483 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 EFCC1Q9HA90 598 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 hCG_1984214I3L0E3 225 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 MAPK4P31152 587 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 LACTBP83111 547 aaPredicted RBP20.25■□□□□ 0.83
LINC00271-201ENST00000421378 CUL4AQ13619 759 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 PKN1Q16512 942 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 ZNF713Q8N859 430 aaPredicted RBP20.25■□□□□ 0.83
LINC00271-201ENST00000421378 GPKOWQ92917 476 aaPredicted RBP eCLIP20.25■□□□□ 0.83
LINC00271-201ENST00000421378 DDX11Q96FC9 970 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 TRERF1Q96PN7 1200 aa20.25■□□□□ 0.83
LINC00271-201ENST00000421378 RNF146Q9NTX7 359 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms