RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 FAM184BQ9ULE4 1060 aa25.18■■□□□ 1.62
PTPN4-202ENST00000420482 ATP11BQ9Y2G3 1177 aa25.18■■□□□ 1.62
PTPN4-202ENST00000420482 LTBP2Q14767 1821 aa25.18■■□□□ 1.62
PTPN4-202ENST00000420482 NMT2O60551 498 aa25.17■■□□□ 1.62
PTPN4-202ENST00000420482 IGHDP01880 384 aa25.17■■□□□ 1.62
PTPN4-202ENST00000420482 ZNF865P0CJ78 1059 aaPredicted RBP25.17■■□□□ 1.62
PTPN4-202ENST00000420482 ADCYAP1R1P41586 468 aa25.17■■□□□ 1.62
PTPN4-202ENST00000420482 CCDC96Q2M329 555 aa25.17■■□□□ 1.62
PTPN4-202ENST00000420482 KCTD1Q719H9 257 aa25.17■■□□□ 1.62
PTPN4-202ENST00000420482 PLEKHM2Q8IWE5 1019 aa25.17■■□□□ 1.62
PTPN4-202ENST00000420482 DCAF4Q8WV16 495 aa25.17■■□□□ 1.62
PTPN4-202ENST00000420482 HOMER2Q9NSB8 354 aa25.17■■□□□ 1.62
PTPN4-202ENST00000420482 NT5C2P49902 561 aa25.16■■□□□ 1.62
PTPN4-202ENST00000420482 ZNF589Q86UQ0 364 aaPredicted RBP25.16■■□□□ 1.62
PTPN4-202ENST00000420482 ABHD16BQ9H3Z7 469 aa25.16■■□□□ 1.62
PTPN4-202ENST00000420482 TCP11L1Q9NUJ3 509 aa25.16■■□□□ 1.62
PTPN4-202ENST00000420482 ZHX1Q9UKY1 873 aaPredicted RBP25.16■■□□□ 1.62
PTPN4-202ENST00000420482 TOP1P11387 765 aaKnown RBP25.15■■□□□ 1.62
PTPN4-202ENST00000420482 NOVP48745 357 aa25.15■■□□□ 1.62
PTPN4-202ENST00000420482 AKNAD1Q5T1N1 836 aa25.15■■□□□ 1.62
PTPN4-202ENST00000420482 RNF146Q9NTX7 359 aa25.15■■□□□ 1.62
PTPN4-202ENST00000420482 MTMR7Q9Y216 660 aa25.15■■□□□ 1.62
PTPN4-202ENST00000420482 POTEB2H3BUK9 544 aa25.14■■□□□ 1.62
PTPN4-202ENST00000420482 TAL1P17542 331 aaPredicted RBP25.14■■□□□ 1.62
PTPN4-202ENST00000420482 MDM2Q00987 491 aaPredicted RBP25.14■■□□□ 1.62
PTPN4-202ENST00000420482 C1orf53Q5VUE5 145 aa25.14■■□□□ 1.62
PTPN4-202ENST00000420482 FERMT2Q96AC1 680 aa25.14■■□□□ 1.62
PTPN4-202ENST00000420482 CHMP4CQ96CF2 233 aa25.14■■□□□ 1.62
PTPN4-202ENST00000420482 TTC14Q96N46 770 aa25.14■■□□□ 1.62
PTPN4-202ENST00000420482 SPC25Q9HBM1 224 aa25.14■■□□□ 1.62
PTPN4-202ENST00000420482 PRR12Q9ULL5 1215 aa25.14■■□□□ 1.62
PTPN4-202ENST00000420482 PHF24Q9UPV7 400 aa25.14■■□□□ 1.62
PTPN4-202ENST00000420482 ZNF213O14771 459 aa25.13■■□□□ 1.61
PTPN4-202ENST00000420482 SNAI1O95863 264 aaPredicted RBP25.13■■□□□ 1.61
PTPN4-202ENST00000420482 PGK1P00558 417 aa25.13■■□□□ 1.61
PTPN4-202ENST00000420482 ALAS1P13196 640 aa25.13■■□□□ 1.61
PTPN4-202ENST00000420482 HAND2P61296 217 aa25.13■■□□□ 1.61
PTPN4-202ENST00000420482 ACVR2BQ13705 512 aa25.13■■□□□ 1.61
PTPN4-202ENST00000420482 ESR2Q92731 530 aa25.13■■□□□ 1.61
PTPN4-202ENST00000420482 AGBL1Q96MI9 1066 aa25.13■■□□□ 1.61
PTPN4-202ENST00000420482 TRERF1Q96PN7 1200 aa25.13■■□□□ 1.61
PTPN4-202ENST00000420482 TSEN34Q9BSV6 310 aaKnown RBP25.13■■□□□ 1.61
PTPN4-202ENST00000420482 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.13■■□□□ 1.61
PTPN4-202ENST00000420482 PNMA2Q9UL42 364 aa25.13■■□□□ 1.61
PTPN4-202ENST00000420482 SNX17Q15036 470 aa25.12■■□□□ 1.61
PTPN4-202ENST00000420482 CCDC174Q6PII3 467 aa25.12■■□□□ 1.61
PTPN4-202ENST00000420482 CWC27Q6UX04 472 aaKnown RBP25.12■■□□□ 1.61
PTPN4-202ENST00000420482 SLC17A8Q8NDX2 589 aa25.12■■□□□ 1.61
PTPN4-202ENST00000420482 NUP133Q8WUM0 1156 aa25.12■■□□□ 1.61
PTPN4-202ENST00000420482 ASB14A6NK59 587 aa25.11■■□□□ 1.61
PTPN4-202ENST00000420482 DUSP11O75319 330 aaKnown RBP25.11■■□□□ 1.61
PTPN4-202ENST00000420482 CCDC178Q5BJE1 867 aa25.11■■□□□ 1.61
PTPN4-202ENST00000420482 ARMCX2Q7L311 632 aa25.11■■□□□ 1.61
PTPN4-202ENST00000420482 DEFB123Q8N688 67 aa25.11■■□□□ 1.61
PTPN4-202ENST00000420482 TMEM47Q9BQJ4 181 aa25.11■■□□□ 1.61
PTPN4-202ENST00000420482 PRDM5Q9NQX1 630 aaPredicted RBP25.11■■□□□ 1.61
PTPN4-202ENST00000420482 CCPG1Q9ULG6 757 aa25.11■■□□□ 1.61
PTPN4-202ENST00000420482 SUPT16HQ9Y5B9 1047 aaKnown RBP25.11■■□□□ 1.61
PTPN4-202ENST00000420482 TACC3Q9Y6A5 838 aa25.11■■□□□ 1.61
PTPN4-202ENST00000420482 ZNF536O15090 1300 aa25.11■■□□□ 1.61
PTPN4-202ENST00000420482 MOXD2PA6NHM9 499 aa25.1■■□□□ 1.61
PTPN4-202ENST00000420482 TRIM60Q495X7 471 aa25.1■■□□□ 1.61
PTPN4-202ENST00000420482 A1CFQ9NQ94 594 aaKnown RBP25.1■■□□□ 1.61
PTPN4-202ENST00000420482 SYNRGQ9UMZ2 1314 aa25.1■■□□□ 1.61
PTPN4-202ENST00000420482 ICAM1P05362 532 aa25.09■■□□□ 1.61
PTPN4-202ENST00000420482 BTNL9Q6UXG8 535 aa25.09■■□□□ 1.61
PTPN4-202ENST00000420482 IQCA1Q86XH1 822 aa25.09■■□□□ 1.61
PTPN4-202ENST00000420482 CCDC144CPQ8IYA2 1237 aa25.09■■□□□ 1.61
PTPN4-202ENST00000420482 FAM133AQ8N9E0 248 aa25.09■■□□□ 1.61
PTPN4-202ENST00000420482 PCSK9Q8NBP7 692 aaKnown RBP25.09■■□□□ 1.61
PTPN4-202ENST00000420482 CTNNA3Q9UI47 895 aa25.09■■□□□ 1.61
PTPN4-202ENST00000420482 SMCHD1A6NHR9 2005 aa25.08■■□□□ 1.61
PTPN4-202ENST00000420482 A0A1W2PQ45 241 aaPredicted RBP25.08■■□□□ 1.61
PTPN4-202ENST00000420482 A0A1W2PQY0 241 aa25.08■■□□□ 1.61
PTPN4-202ENST00000420482 ADAMTS4O75173 837 aa25.08■■□□□ 1.61
PTPN4-202ENST00000420482 CCDC144BQ3MJ40 725 aa25.08■■□□□ 1.61
PTPN4-202ENST00000420482 SYDE2Q5VT97 1194 aa25.08■■□□□ 1.61
PTPN4-202ENST00000420482 Q7L0L9 218 aa25.08■■□□□ 1.61
PTPN4-202ENST00000420482 RANBP17Q9H2T7 1088 aaKnown RBP25.08■■□□□ 1.61
PTPN4-202ENST00000420482 ACLYP53396 1101 aa25.07■■□□□ 1.6
PTPN4-202ENST00000420482 CNTN2Q02246 1040 aa25.07■■□□□ 1.6
PTPN4-202ENST00000420482 IMMTQ16891 758 aaKnown RBP25.07■■□□□ 1.6
PTPN4-202ENST00000420482 DSCC1Q9BVC3 393 aa25.07■■□□□ 1.6
PTPN4-202ENST00000420482 STARD7Q9NQZ5 370 aa25.07■■□□□ 1.6
PTPN4-202ENST00000420482 CUL9Q8IWT3 2517 aa25.07■■□□□ 1.6
PTPN4-202ENST00000420482 C6orf222P0C671 652 aaPredicted RBP25.06■■□□□ 1.6
PTPN4-202ENST00000420482 PDHBP11177 359 aa25.06■■□□□ 1.6
PTPN4-202ENST00000420482 SNAP25P60880 206 aa25.06■■□□□ 1.6
PTPN4-202ENST00000420482 NSMFQ6X4W1 530 aa25.06■■□□□ 1.6
PTPN4-202ENST00000420482 DGKHQ86XP1 1220 aa25.06■■□□□ 1.6
PTPN4-202ENST00000420482 TBC1D10CQ8IV04 446 aa25.06■■□□□ 1.6
PTPN4-202ENST00000420482 LENG1Q96BZ8 264 aaPredicted RBP25.06■■□□□ 1.6
PTPN4-202ENST00000420482 FGD4Q96M96 766 aa25.06■■□□□ 1.6
PTPN4-202ENST00000420482 GLT1D1Q96MS3 346 aa25.06■■□□□ 1.6
PTPN4-202ENST00000420482 GPCPD1Q9NPB8 672 aa25.06■■□□□ 1.6
PTPN4-202ENST00000420482 MTMR10Q9NXD2 777 aa25.06■■□□□ 1.6
PTPN4-202ENST00000420482 ADD3Q9UEY8 706 aaKnown RBP25.06■■□□□ 1.6
PTPN4-202ENST00000420482 FRMPD2Q68DX3 1309 aaPredicted RBP25.06■■□□□ 1.6
PTPN4-202ENST00000420482 CST5P28325 142 aaPredicted RBP25.05■■□□□ 1.6
PTPN4-202ENST00000420482 SLC16A2P36021 539 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms