RNA–Protein interactions for RNA: ENST00000420246.6

TP53-204, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-204ENST00000420246 LRRC10BA6NIK2 292 aa13.5□□□□□ -0.25
TP53-204ENST00000420246 ONECUT3O60422 494 aaPredicted RBP13.5□□□□□ -0.25
TP53-204ENST00000420246 CCNT1O60563 726 aaKnown RBP13.5□□□□□ -0.25
TP53-204ENST00000420246 GYPCP04921 128 aa13.5□□□□□ -0.25
TP53-204ENST00000420246 GAKO14976 1311 aa13.5□□□□□ -0.25
TP53-204ENST00000420246 A0A0U1RQJ8 604 aa13.5□□□□□ -0.25
TP53-204ENST00000420246 MFAP3LO75121 409 aa13.5□□□□□ -0.25
TP53-204ENST00000420246 HOXA10P31260 410 aaPredicted RBP13.5□□□□□ -0.25
TP53-204ENST00000420246 PMS1P54277 932 aaKnown RBP13.5□□□□□ -0.25
TP53-204ENST00000420246 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
TP53-204ENST00000420246 ATRIPQ8WXE1 791 aa13.5□□□□□ -0.25
TP53-204ENST00000420246 RRP36Q96EU6 259 aaKnown RBP13.5□□□□□ -0.25
TP53-204ENST00000420246 FEZ1Q99689 392 aa13.5□□□□□ -0.25
TP53-204ENST00000420246 LIMA1Q9UHB6 759 aaKnown RBP13.5□□□□□ -0.25
TP53-204ENST00000420246 FRMPD2Q68DX3 1309 aaPredicted RBP13.5□□□□□ -0.25
TP53-204ENST00000420246 KCNJ18B7U540 433 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 RNF225M0QZC1 329 aaPredicted RBP13.49□□□□□ -0.25
TP53-204ENST00000420246 POLRMTO00411 1230 aaKnown RBP13.49□□□□□ -0.25
TP53-204ENST00000420246 KCNJ12Q14500 433 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 TXNRD1Q16881 649 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 TCP11X2Q5H9J9 407 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 CLEC10AQ8IUN9 316 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 TBC1D22AQ8WUA7 517 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 CCSER1Q9C0I3 900 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 SEC63Q9UGP8 760 aaKnown RBP13.49□□□□□ -0.25
TP53-204ENST00000420246 DDX60LQ5H9U9 1706 aaKnown RBP13.49□□□□□ -0.25
TP53-204ENST00000420246 GOLGA6L9A6NEM1 432 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 COPB1P53618 953 aaKnown RBP13.49□□□□□ -0.25
TP53-204ENST00000420246 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
TP53-204ENST00000420246 JAKMIP3Q5VZ66 844 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 SLF2Q8IX21 1173 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 ADSSL1Q8N142 457 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 MXD3Q9BW11 206 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 CARD6Q9BX69 1037 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 C6orf50Q9HD87 102 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 LZTFL1Q9NQ48 299 aa13.49□□□□□ -0.25
TP53-204ENST00000420246 BIN2Q9UBW5 565 aaPredicted RBP13.49□□□□□ -0.25
TP53-204ENST00000420246 KLRC4O43908 158 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 CCDC175P0C221 793 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 GNA11P29992 359 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 CASQ1P31415 396 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 KRT25Q7Z3Z0 450 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 IRF2BP1Q8IU81 584 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 LRRC47Q8N1G4 583 aaKnown RBP13.48□□□□□ -0.25
TP53-204ENST00000420246 TBCKQ8TEA7 893 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 CCDC12Q8WUD4 166 aaPredicted RBP13.48□□□□□ -0.25
TP53-204ENST00000420246 CRAMP1Q96RY5 1269 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 KBTBD4Q9NVX7 518 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 TMEM260Q9NX78 707 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 DDX41Q9UJV9 622 aaKnown RBP13.48□□□□□ -0.25
TP53-204ENST00000420246 PRDM4Q9UKN5 801 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 ADGRG1Q9Y653 693 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 LAD1O00515 517 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 TRIM37O94972 964 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 OR52Z1P0C646 297 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 PDHBP11177 359 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 PLCG1P19174 1290 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 PRPHP41219 470 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 TECP42680 631 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 ARHGAP29Q52LW3 1261 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 EEF2KMTQ96G04 330 aa13.48□□□□□ -0.25
TP53-204ENST00000420246 AKR1B1P15121 316 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
TP53-204ENST00000420246 SPAG1Q07617 926 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 NEK8Q86SG6 692 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 CABP7Q86V35 215 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 CNGA4Q8IV77 575 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 CERS5Q8N5B7 392 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 MNS1Q8NEH6 495 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 KIFC2Q96AC6 838 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 DDX4Q9NQI0 724 aaKnown RBP13.47□□□□□ -0.25
TP53-204ENST00000420246 OGFRQ9NZT2 677 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 ITIH6Q6UXX5 1313 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 CDK5RAP2Q96SN8 1893 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 PPEF1O14829 653 aaPredicted RBP13.47□□□□□ -0.25
TP53-204ENST00000420246 NOVP48745 357 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 ANKRD20A12PQ8NF67 263 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 UBXN4Q92575 508 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 COA7Q96BR5 231 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 NAA15Q9BXJ9 866 aaKnown RBP13.47□□□□□ -0.25
TP53-204ENST00000420246 MTMR4Q9NYA4 1195 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 GOLGB1Q14789 3259 aaKnown RBP13.47□□□□□ -0.25
TP53-204ENST00000420246 H7C1D1 291 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 UBXN1Q04323 297 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 KCNB1Q14721 858 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 REXO1Q8N1G1 1221 aaKnown RBP13.47□□□□□ -0.25
TP53-204ENST00000420246 NUP88Q99567 741 aaPredicted RBP13.47□□□□□ -0.25
TP53-204ENST00000420246 ZNF446Q9NWS9 450 aa13.47□□□□□ -0.25
TP53-204ENST00000420246 TRPC5Q9UL62 973 aaPredicted RBP13.47□□□□□ -0.25
TP53-204ENST00000420246 UBR3Q6ZT12 1888 aa13.46□□□□□ -0.25
TP53-204ENST00000420246 KLRG2A4D1S0 409 aaPredicted RBP13.46□□□□□ -0.25
TP53-204ENST00000420246 RHOBTB3O94955 611 aa13.46□□□□□ -0.25
TP53-204ENST00000420246 SLURP2P0DP57 97 aa13.46□□□□□ -0.25
TP53-204ENST00000420246 H2AFXP16104 143 aaPredicted RBP13.46□□□□□ -0.25
TP53-204ENST00000420246 SCNN1DP51172 638 aa13.46□□□□□ -0.25
TP53-204ENST00000420246 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
TP53-204ENST00000420246 GABPAQ06546 454 aa13.46□□□□□ -0.25
TP53-204ENST00000420246 DOK7Q18PE1 504 aa13.46□□□□□ -0.25
TP53-204ENST00000420246 DPP8Q6V1X1 898 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms