RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 GTF2IRD2Q86UP8 949 aa3.97□□□□□ -1.77
VPS41-206ENST00000418457 CCDC120Q96HB5 630 aa3.97□□□□□ -1.77
VPS41-206ENST00000418457 MRGPRX3Q96LB0 322 aa3.97□□□□□ -1.77
VPS41-206ENST00000418457 CDADC1Q9BWV3 514 aa3.97□□□□□ -1.77
VPS41-206ENST00000418457 SLC12A9Q9BXP2 914 aa3.97□□□□□ -1.77
VPS41-206ENST00000418457 CWC22Q9HCG8 908 aaKnown RBP3.97□□□□□ -1.77
VPS41-206ENST00000418457 PFDN2Q9UHV9 154 aa3.97□□□□□ -1.77
VPS41-206ENST00000418457 ZMYM5Q9UJ78 669 aa3.97□□□□□ -1.77
VPS41-206ENST00000418457 TMEM59LQ9UK28 342 aa3.97□□□□□ -1.77
VPS41-206ENST00000418457 GPR55Q9Y2T6 319 aaPredicted RBP3.97□□□□□ -1.77
VPS41-206ENST00000418457 DNAJC25-GNG10A0A024R161 153 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 A0A1W2PQU0 124 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 TMEM82A0PJX8 343 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 STXBP3O00186 592 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 AURKAO14965 403 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 ZGLP1P0C6A0 271 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 IFNGR1P15260 489 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 PPP2R2AP63151 447 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 DUSP4Q13115 394 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 HSP90AA2PQ14568 343 aaPredicted RBP3.96□□□□□ -1.78
VPS41-206ENST00000418457 ZNF792Q3KQV3 632 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 RALGPS1Q5JS13 557 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 RTP2Q5QGT7 225 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 ZPBP2Q6X784 338 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 ABI1Q8IZP0 508 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 Q8N3U1 123 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 NAT16Q8N8M0 369 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 BTN2A2Q8WVV5 523 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 FCRL2Q96LA5 508 aaPredicted RBP3.96□□□□□ -1.78
VPS41-206ENST00000418457 FCRL3Q96P31 734 aaPredicted RBP3.96□□□□□ -1.78
VPS41-206ENST00000418457 DNAJC7Q99615 494 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 MCMBPQ9BTE3 642 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 AARSD1Q9BTE6 412 aaKnown RBP3.96□□□□□ -1.78
VPS41-206ENST00000418457 SPATA9Q9BWV2 254 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 ADAMTS10Q9H324 1103 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 PIF1Q9H611 641 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 RC3H2Q9HBD1 1191 aaKnown RBP3.96□□□□□ -1.78
VPS41-206ENST00000418457 MBNL3Q9NUK0 354 aaKnown RBP3.96□□□□□ -1.78
VPS41-206ENST00000418457 AP5S1Q9NUS5 200 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 ADAMTS6Q9UKP5 1117 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 BACE2Q9Y5Z0 518 aa3.96□□□□□ -1.78
VPS41-206ENST00000418457 KDM2BQ8NHM5 1336 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 CCDC180Q9P1Z9 1646 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 C2orf71A6NGG8 1288 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 TBX1O43435 398 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 DIAPH1O60610 1272 aaKnown RBP3.95□□□□□ -1.78
VPS41-206ENST00000418457 RNASE1P07998 156 aaKnown RBP3.95□□□□□ -1.78
VPS41-206ENST00000418457 HOXC12P31275 282 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 SEPHS1P49903 392 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 HK2P52789 917 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 SCRN1Q12765 414 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 RCSD1Q6JBY9 416 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 KSR1Q8IVT5 923 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 CCDC140Q96MF4 163 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 NKX2-4Q9H2Z4 354 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 CYP26B1Q9NR63 512 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 ZNF281Q9Y2X9 895 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 ABCC9O60706 1549 aa3.95□□□□□ -1.78
VPS41-206ENST00000418457 TRAV20A0A0B4J274 112 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 FGF10O15520 208 aaPredicted RBP3.94□□□□□ -1.78
VPS41-206ENST00000418457 CPP00450 1065 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 SNRPB2P08579 225 aaKnown RBP3.94□□□□□ -1.78
VPS41-206ENST00000418457 RAC2P15153 192 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 GDNFP39905 211 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 ECI1P42126 302 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 KCNJ6P48051 423 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 CHRNEQ04844 493 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 EEF1DP3Q658K8 133 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 CYP2R1Q6VVX0 501 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 NOP9Q86U38 636 aaKnown RBP3.94□□□□□ -1.78
VPS41-206ENST00000418457 SPPL2CQ8IUH8 684 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 OXR1Q8N573 874 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 ANKS4BQ8N8V4 417 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 ZBTB38Q8NAP3 1195 aaPredicted RBP3.94□□□□□ -1.78
VPS41-206ENST00000418457 PDZD8Q8NEN9 1154 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 THAP3Q8WTV1 239 aaPredicted RBP3.94□□□□□ -1.78
VPS41-206ENST00000418457 LINC01599Q8WXQ3 324 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 MAP6Q96JE9 813 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 G6PC3Q9BUM1 346 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 ARHGEF4Q9NR80 690 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 ERVK13-1Q9NX77 482 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 TNFRSF10DQ9UBN6 386 aa3.94□□□□□ -1.78
VPS41-206ENST00000418457 OAS3Q9Y6K5 1087 aaKnown RBP3.94□□□□□ -1.78
VPS41-206ENST00000418457 FITM1A5D6W6 292 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 FADS2P1A8MWK0 482 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 ADCY3O60266 1144 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 USP2O75604 605 aaPredicted RBP3.93□□□□□ -1.78
VPS41-206ENST00000418457 TBC1D8O95759 1140 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 CAPNS1P04632 268 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 SCG5P05408 212 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 FAM153BP0C7A2 387 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 FGFR1P11362 822 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 PAMP19021 973 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 GRIA2P42262 883 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 KIR2DL1P43626 348 aaPredicted RBP3.93□□□□□ -1.78
VPS41-206ENST00000418457 KIR2DL2P43627 348 aaPredicted RBP3.93□□□□□ -1.78
VPS41-206ENST00000418457 GFRA1P56159 465 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 SF1Q15637 639 aaKnown RBP3.93□□□□□ -1.78
VPS41-206ENST00000418457 SLC14A2Q15849 920 aa3.93□□□□□ -1.78
VPS41-206ENST00000418457 LONRF2Q1L5Z9 754 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms