RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 AUHQ13825 339 aaKnown RBP5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 NR0B2Q15466 257 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 C9orf131Q5VYM1 1079 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 CCDC81Q6ZN84 652 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 ANKLE2Q86XL3 938 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 ZNF654Q8IZM8 581 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 LINC00116Q8NCU8 138 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 BHLHE22Q8NFJ8 381 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 KCNN1Q92952 543 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 MAP6Q96JE9 813 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 CDADC1Q9BWV3 514 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 CWC22Q9HCG8 908 aaKnown RBP5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 SUCOQ9UBS9 1254 aaKnown RBP5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 YBX2Q9Y2T7 364 aaKnown RBP5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 PRG4Q92954 1404 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 KIF14Q15058 1648 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 TMEM82A0PJX8 343 aa5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 TP53P04637 393 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 NUP153P49790 1475 aaKnown RBP5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 PAK2Q13177 524 aa5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 BBS9Q3SYG4 887 aa5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 TMEM132EQ6IEE7 984 aa5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 RUFY4Q6ZNE9 571 aa5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 LINC01599Q8WXQ3 324 aa5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 INTS4Q96HW7 963 aaKnown RBP5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 TOX2Q96NM4 488 aa5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 SLC26A8Q96RN1 970 aa5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 CRBNQ96SW2 442 aa5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 G6PC3Q9BUM1 346 aa5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 RRBP1Q9P2E9 1410 aaKnown RBP5.61□□□□□ -1.51
HMGB3P20-201ENST00000417997 PTPN23Q9H3S7 1636 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 ERCC6L2Q5T890 1561 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 MAGI3Q5TCQ9 1506 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 PLB1Q6P1J6 1458 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 TCAF2A6NFQ2 919 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 C9IYK1 514 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 NPIPB6E9PJ23 425 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 SNX17Q15036 470 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 NOL9Q5SY16 702 aaKnown RBP5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 ADGRF1Q5T601 910 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 INTS3Q68E01 1043 aaKnown RBP5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 CRTC3Q6UUV7 619 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 ATG14Q6ZNE5 492 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 IRF2BP1Q8IU81 584 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 C7orf61Q8IZ16 206 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 MRRFQ96E11 262 aaKnown RBP5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 HHIPL1Q96JK4 782 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 TM9SF2Q99805 663 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 GINM1Q9NU53 330 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 EFR3BQ9Y2G0 817 aa5.6□□□□□ -1.51
HMGB3P20-201ENST00000417997 ABCC2Q92887 1545 aa5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 NCOA2Q15596 1464 aa5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 CCNB3Q8WWL7 1395 aa5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 ETV2O00321 342 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 VAMP1P23763 118 aa5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 GUCY2CP25092 1073 aa5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 KIR2DL1P43626 348 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 KIR2DL2P43627 348 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 PMS1P54277 932 aaKnown RBP5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 RTP1P59025 263 aa5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 ZYXQ15942 572 aaKnown RBP5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 DCAF15Q66K64 600 aa5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 CWF19L1Q69YN2 538 aaKnown RBP5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 NT5DC4Q86YG4 428 aa5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 LRRC56Q8IYG6 542 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 ZSCAN18Q8TBC5 510 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 GPR55Q9Y2T6 319 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P20-201ENST00000417997 ZCCHC11Q5TAX3 1644 aaKnown RBP5.59□□□□□ -1.52
HMGB3P20-201ENST00000417997 SDHBP21912 280 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 CFPP27918 469 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 BMP8BP34820 402 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 CTSKP43235 329 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 AXDND1Q5T1B0 1012 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 UNC5AQ6ZN44 842 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 NLRX1Q86UT6 975 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 PPFIBP1Q86W92 1011 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 LSRQ86X29 649 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 NAT16Q8N8M0 369 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 BRF1Q92994 677 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 GPRASP2Q96D09 838 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 SHISA4Q96DD7 197 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 FCRL2Q96LA5 508 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 ZNF281Q9Y2X9 895 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 TAF6LQ9Y6J9 622 aa5.58□□□□□ -1.52
HMGB3P20-201ENST00000417997 PTPRGP23470 1445 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 MYOM3Q5VTT5 1437 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 CDC42BPAQ5VT25 1732 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 MYO5CQ9NQX4 1742 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 PHLDB1Q86UU1 1377 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 ADGBQ8N7X0 1667 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 OR14I1A6ND48 311 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 NOTOA8MTQ0 251 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 NRDCO43847 1150 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 EFEMP2O95967 443 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 GSNP06396 782 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 GSTM1P09488 218 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 VAV1P15498 845 aa5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 ENDOUP21128 410 aaKnown RBP5.57□□□□□ -1.52
HMGB3P20-201ENST00000417997 EIF6P56537 245 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms