RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ZMYND10O75800 440 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 VEGFAP15692 232 aaPredicted RBP10.99□□□□□ -0.65
CD44-206ENST00000415148 PPP1R2P41236 205 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 SIK1P57059 783 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 KRT83P78385 493 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 DGKHQ86XP1 1220 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 GSPT2Q8IYD1 628 aaKnown RBP10.99□□□□□ -0.65
CD44-206ENST00000415148 RETREG2Q8NC44 543 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 DAGLBQ8NCG7 672 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 ZNF507Q8TCN5 953 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 RPGRIP1Q96KN7 1286 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 CCSER1Q9C0I3 900 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 CUEDC2Q9H467 287 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 MAGEF1Q9HAY2 307 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 DISC1Q9NRI5 854 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 LUC7L2Q9Y383 392 aaKnown RBP10.99□□□□□ -0.65
CD44-206ENST00000415148 M0R2N6 131 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 RHOBTB3O94955 611 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 DNM2P50570 870 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 SLC10A5Q5PT55 438 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 DTHD1Q6ZMT9 781 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 IRF2BP1Q8IU81 584 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 CERS3Q8IU89 383 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 EHBP1Q8NDI1 1231 aa10.99□□□□□ -0.65
CD44-206ENST00000415148 DHTKD1Q96HY7 919 aaPredicted RBP10.99□□□□□ -0.65
CD44-206ENST00000415148 ADAMTS2O95450 1211 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 PRPHP41219 470 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 MECOMQ03112 1051 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 LRRC31Q6UY01 552 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 TRAPPC11Q7Z392 1133 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 CCDC102AQ96A19 550 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 IQCDQ96DY2 449 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 VIPAS39Q9H9C1 493 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 CWC15Q9P013 229 aaKnown RBP10.98□□□□□ -0.65
CD44-206ENST00000415148 MAGEC2Q9UBF1 373 aaPredicted RBP10.98□□□□□ -0.65
CD44-206ENST00000415148 THRAP3Q9Y2W1 955 aaKnown RBP10.98□□□□□ -0.65
CD44-206ENST00000415148 KIAA1551Q9HCM1 1747 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 TTC26A0AVF1 554 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 TRIM49BA6NDI0 452 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 WTIPA6NIX2 430 aaPredicted RBP10.98□□□□□ -0.65
CD44-206ENST00000415148 TSPY2A6NKD2 308 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 PSMA7O14818 248 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 MEA1Q16626 185 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 SKIDA1Q1XH10 827 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 PAPD7Q5XG87 772 aaKnown RBP10.98□□□□□ -0.65
CD44-206ENST00000415148 RCSD1Q6JBY9 416 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 GIMAP8Q8ND71 665 aaPredicted RBP10.98□□□□□ -0.65
CD44-206ENST00000415148 RASSF4Q9H2L5 321 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 KAT14Q9H8E8 782 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 KBTBD4Q9NVX7 518 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 GUCA1BQ9UMX6 200 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 GDAQ9Y2T3 454 aa10.98□□□□□ -0.65
CD44-206ENST00000415148 MAST2Q6P0Q8 1798 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 SYF2O95926 243 aaKnown RBP10.97□□□□□ -0.65
CD44-206ENST00000415148 MYBL2P10244 700 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 FAM47AQ5JRC9 791 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 CCDC170Q8IYT3 715 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 FAM71BQ8TC56 605 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 CCDC47Q96A33 483 aaKnown RBP10.97□□□□□ -0.65
CD44-206ENST00000415148 AK8Q96MA6 479 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 MMS19Q96T76 1030 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 MED4Q9NPJ6 270 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 TCP11L1Q9NUJ3 509 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 ZC3H4Q9UPT8 1303 aaKnown RBP10.97□□□□□ -0.65
CD44-206ENST00000415148 COL4A1P02462 1669 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 CCDC194A0A1B0GVG4 234 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 TARSL2A2RTX5 802 aaKnown RBP10.97□□□□□ -0.65
CD44-206ENST00000415148 NKRFO15226 690 aaKnown RBP eCLIP10.97□□□□□ -0.65
CD44-206ENST00000415148 KRT86O43790 486 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 KLRC4O43908 158 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 NMT2O60551 498 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 ATP1A1P05023 1023 aaKnown RBP10.97□□□□□ -0.65
CD44-206ENST00000415148 SRGNP10124 158 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 PMS1P54277 932 aaKnown RBP10.97□□□□□ -0.65
CD44-206ENST00000415148 CDK17Q00537 523 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 ITPK1Q13572 414 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 GRM4Q14833 912 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 ERFEQ4G0M1 354 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 NAALADL2Q58DX5 795 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 FAM114A1Q8IWE2 563 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 EEF2KMTQ96G04 330 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 ANKRD2Q9GZV1 360 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 FAM204AQ9H8W3 233 aa10.97□□□□□ -0.65
CD44-206ENST00000415148 ZNF831Q5JPB2 1677 aa10.96□□□□□ -0.65
CD44-206ENST00000415148 BICDL2A1A5D9 508 aa10.96□□□□□ -0.65
CD44-206ENST00000415148 RCCD1A6NED2 376 aa10.96□□□□□ -0.65
CD44-206ENST00000415148 RPS6KA5O75582 802 aa10.96□□□□□ -0.65
CD44-206ENST00000415148 HIBADHP31937 336 aaKnown RBP10.96□□□□□ -0.65
CD44-206ENST00000415148 CYLC1P35663 651 aaPredicted RBP10.96□□□□□ -0.65
CD44-206ENST00000415148 UBA7P41226 1012 aa10.96□□□□□ -0.65
CD44-206ENST00000415148 USP14P54578 494 aa10.96□□□□□ -0.65
CD44-206ENST00000415148 HERVK_113P62684 666 aa10.96□□□□□ -0.65
CD44-206ENST00000415148 MRPS25P82663 173 aaKnown RBP10.96□□□□□ -0.65
CD44-206ENST00000415148 CKAP4Q07065 602 aaKnown RBP10.96□□□□□ -0.65
CD44-206ENST00000415148 MAP9Q49MG5 647 aa10.96□□□□□ -0.65
CD44-206ENST00000415148 COBLL1Q53SF7 1204 aa10.96□□□□□ -0.65
CD44-206ENST00000415148 FIGNQ5HY92 759 aa10.96□□□□□ -0.65
CD44-206ENST00000415148 SPTY2D1Q68D10 685 aaPredicted RBP10.96□□□□□ -0.65
CD44-206ENST00000415148 WDR59Q6PJI9 974 aa10.96□□□□□ -0.65
CD44-206ENST00000415148 SMARCC1Q92922 1105 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms