RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 MORC3Q14149 939 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 NBPF8Q3BBV2 869 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 SLC10A6Q3KNW5 377 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 KIAA0319Q5VV43 1072 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 OVOS1Q6IE37 1185 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 TTC8Q8TAM2 541 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 WDR66Q8TBY9 1149 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 THAP3Q8WTV1 239 aaPredicted RBP3.25□□□□□ -1.89
MCF2-204ENST00000414978 IPO9Q96P70 1041 aaKnown RBP3.25□□□□□ -1.89
MCF2-204ENST00000414978 KLF16Q9BXK1 252 aaPredicted RBP3.25□□□□□ -1.89
MCF2-204ENST00000414978 USP26Q9BXU7 913 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 RHOBTB2Q9BYZ6 727 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 CDH19Q9H159 772 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 REV1Q9UBZ9 1251 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 TAGLN3Q9UI15 199 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 SLC45A1Q9Y2W3 748 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 SPATA31A5Q5VU36 1347 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 SPATA31A7Q8IWB4 1347 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 LTBP3Q9NS15 1303 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 GSG1L2A8MUP6 293 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 OPA1O60313 960 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 ABLIM3O94929 683 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 MAPTP10636 758 aaKnown RBP3.25□□□□□ -1.89
MCF2-204ENST00000414978 GPSM2P81274 684 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 PPP2R3AQ06190 1150 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 HYAL2Q12891 473 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 SF1Q15637 639 aaKnown RBP3.25□□□□□ -1.89
MCF2-204ENST00000414978 PTPN21Q16825 1174 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 ZNF423Q2M1K9 1284 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 PLA2G4EQ3MJ16 856 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 AKAP4Q5JQC9 854 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 LVRNQ6Q4G3 990 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 EEPD1Q7L9B9 569 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 TCEAL8Q8IYN2 117 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 MYO1HQ8N1T3 1032 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 IL17REQ8NFR9 667 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 GTPBP3Q969Y2 492 aaKnown RBP3.25□□□□□ -1.89
MCF2-204ENST00000414978 MFSD3Q96ES6 412 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 EXOC2Q96KP1 924 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 SLC26A8Q96RN1 970 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 SUCOQ9UBS9 1254 aaKnown RBP3.25□□□□□ -1.89
MCF2-204ENST00000414978 ZNRF3Q9ULT6 936 aa3.25□□□□□ -1.89
MCF2-204ENST00000414978 ZNF644Q9H582 1327 aaPredicted RBP3.25□□□□□ -1.89
MCF2-204ENST00000414978 NAIPQ13075 1403 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 FAM221AA4D161 298 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 ATXN7O15265 892 aaPredicted RBP3.24□□□□□ -1.89
MCF2-204ENST00000414978 PIP5K1CO60331 668 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 WDHD1O75717 1129 aaPredicted RBP3.24□□□□□ -1.89
MCF2-204ENST00000414978 EPHX1P07099 455 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 TSPY4P0CV99 314 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 TSPY10P0CW01 314 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 PLAURQ03405 335 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 MAPRE1Q15691 268 aaKnown RBP3.24□□□□□ -1.89
MCF2-204ENST00000414978 SLC10A5Q5PT55 438 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 IL31Q6EBC2 164 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 SLITRK4Q8IW52 837 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 ELMO3Q96BJ8 720 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 CLEC4MQ9H2X3 399 aaPredicted RBP3.24□□□□□ -1.89
MCF2-204ENST00000414978 ZNF576Q9H609 170 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 NGRNQ9NPE2 291 aaKnown RBP3.24□□□□□ -1.89
MCF2-204ENST00000414978 APEX2Q9UBZ4 518 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 MCM8Q9UJA3 840 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 ANKRD30AQ9BXX3 1397 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 VSTM5A8MXK1 200 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 SPINT1O43278 529 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 PPP2R5DQ14738 602 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 SETDB1Q15047 1291 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 PCBP1Q15365 356 aaKnown RBP eCLIP3.24□□□□□ -1.89
MCF2-204ENST00000414978 PRSS53Q2L4Q9 553 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 IER5Q5VY09 327 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 PKN3Q6P5Z2 889 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 HDGFL2Q7Z4V5 671 aaPredicted RBP3.24□□□□□ -1.89
MCF2-204ENST00000414978 NXPE1Q8N323 547 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 CEP120Q8N960 986 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 ZFP42Q96MM3 310 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 SLC9A7Q96T83 725 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 ZDHHC3Q9NYG2 299 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 LUC7L2Q9Y383 392 aaKnown RBP3.24□□□□□ -1.89
MCF2-204ENST00000414978 IPPQ9Y573 584 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 SCINQ9Y6U3 715 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 METP08581 1390 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 DLEC1Q9Y238 1755 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 FAM177BA6PVY3 158 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 CHURC1-FNTBB4DL54 471 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 AKAP10O43572 662 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 ACRP10323 421 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 LIG1P18858 919 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 GUCY2CP25092 1073 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 TRAPPC10P48553 1259 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 PCDH1Q08174 1060 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 OS9Q13438 667 aaPredicted RBP3.24□□□□□ -1.89
MCF2-204ENST00000414978 KRT72Q14CN4 511 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 R3HDM1Q15032 1099 aaKnown RBP3.24□□□□□ -1.89
MCF2-204ENST00000414978 XKR5Q6UX68 686 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 UNC5AQ6ZN44 842 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 FGD2Q7Z6J4 655 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 AMOTL1Q8IY63 956 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 GAL3ST3Q96A11 431 aa3.24□□□□□ -1.89
MCF2-204ENST00000414978 WDR89Q96FK6 387 aaPredicted RBP3.24□□□□□ -1.89
MCF2-204ENST00000414978 SMG9Q9H0W8 520 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms