RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 COA7Q96BR5 231 aa29.98■■■□□ 2.39
RHBDD3-203ENST00000413137 SLC38A10Q9HBR0 1119 aa29.98■■■□□ 2.39
RHBDD3-203ENST00000413137 VPS54Q9P1Q0 977 aa29.98■■■□□ 2.39
RHBDD3-203ENST00000413137 PARP14Q460N5 1801 aa29.97■■■□□ 2.39
RHBDD3-203ENST00000413137 IGF2BP3O00425 579 aaKnown RBP eCLIP29.97■■■□□ 2.39
RHBDD3-203ENST00000413137 CYP2C8P10632 490 aa29.97■■■□□ 2.39
RHBDD3-203ENST00000413137 SYT1P21579 422 aa29.97■■■□□ 2.39
RHBDD3-203ENST00000413137 IRX3P78415 501 aaPredicted RBP29.97■■■□□ 2.39
RHBDD3-203ENST00000413137 GUCY1B3Q02153 619 aa29.97■■■□□ 2.39
RHBDD3-203ENST00000413137 LARP1BQ659C4 914 aaKnown RBP29.97■■■□□ 2.39
RHBDD3-203ENST00000413137 HEATR3Q7Z4Q2 680 aa29.97■■■□□ 2.39
RHBDD3-203ENST00000413137 ANKRD23Q86SG2 305 aa29.97■■■□□ 2.39
RHBDD3-203ENST00000413137 CAPNS2Q96L46 248 aa29.97■■■□□ 2.39
RHBDD3-203ENST00000413137 RBM27Q9P2N5 1060 aaKnown RBP29.97■■■□□ 2.39
RHBDD3-203ENST00000413137 AOC2O75106 756 aa29.96■■■□□ 2.39
RHBDD3-203ENST00000413137 REPS2Q8NFH8 660 aa29.96■■■□□ 2.39
RHBDD3-203ENST00000413137 HOXC10Q9NYD6 342 aa29.96■■■□□ 2.39
RHBDD3-203ENST00000413137 ZNF536O15090 1300 aa29.96■■■□□ 2.39
RHBDD3-203ENST00000413137 KIF23Q02241 960 aaPredicted RBP29.95■■■□□ 2.39
RHBDD3-203ENST00000413137 WASF1Q92558 559 aa29.95■■■□□ 2.39
RHBDD3-203ENST00000413137 STXBP3O00186 592 aa29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 AGBL1Q96MI9 1066 aa29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 RAVER2Q9HCJ3 691 aaKnown RBP29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 KCNJ14Q9UNX9 436 aa29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 OSBPP22059 807 aa29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 HERVK_113P62684 666 aa29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 PABPC4Q13310 644 aaKnown RBP eCLIP29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 USH1GQ495M9 461 aa29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 CPXCR1Q8N123 301 aa29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 C8orf76Q96K31 380 aa29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 BARHL2Q9NY43 387 aa29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 SLC45A1Q9Y2W3 748 aa29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 MYPNQ86TC9 1320 aa29.94■■■□□ 2.38
RHBDD3-203ENST00000413137 TMEM132BQ14DG7 1078 aa29.93■■■□□ 2.38
RHBDD3-203ENST00000413137 MYH6P13533 1939 aa29.92■■■□□ 2.38
RHBDD3-203ENST00000413137 ADAMTS3O15072 1205 aa29.92■■■□□ 2.38
RHBDD3-203ENST00000413137 ZBED4O75132 1171 aa29.92■■■□□ 2.38
RHBDD3-203ENST00000413137 KRT40Q6A162 431 aa29.92■■■□□ 2.38
RHBDD3-203ENST00000413137 FBXO11Q86XK2 927 aa29.92■■■□□ 2.38
RHBDD3-203ENST00000413137 IFNL1Q8IU54 200 aa29.92■■■□□ 2.38
RHBDD3-203ENST00000413137 AMNQ9BXJ7 453 aa29.92■■■□□ 2.38
RHBDD3-203ENST00000413137 BTBD7Q9P203 1132 aa29.92■■■□□ 2.38
RHBDD3-203ENST00000413137 PCDHA1Q9Y5I3 950 aa29.92■■■□□ 2.38
RHBDD3-203ENST00000413137 LBX2Q6XYB7 198 aa29.91■■■□□ 2.38
RHBDD3-203ENST00000413137 FBXO18Q8NFZ0 1043 aa29.91■■■□□ 2.38
RHBDD3-203ENST00000413137 TXNRD2Q9NNW7 524 aa29.91■■■□□ 2.38
RHBDD3-203ENST00000413137 KIF3AQ9Y496 699 aa29.91■■■□□ 2.38
RHBDD3-203ENST00000413137 CNMDO75829 334 aa29.9■■■□□ 2.38
RHBDD3-203ENST00000413137 ICAM1P05362 532 aa29.9■■■□□ 2.38
RHBDD3-203ENST00000413137 NOGQ13253 232 aa29.9■■■□□ 2.38
RHBDD3-203ENST00000413137 ZNF214Q9UL59 606 aaPredicted RBP29.9■■■□□ 2.38
RHBDD3-203ENST00000413137 MTMR6Q9Y217 621 aa29.9■■■□□ 2.38
RHBDD3-203ENST00000413137 ZDHHC9Q9Y397 364 aa29.9■■■□□ 2.38
RHBDD3-203ENST00000413137 STX6O43752 255 aa29.9■■■□□ 2.38
RHBDD3-203ENST00000413137 VEGFBP49765 207 aa29.9■■■□□ 2.38
RHBDD3-203ENST00000413137 NAPAP54920 295 aa29.9■■■□□ 2.38
RHBDD3-203ENST00000413137 RBPJLQ9UBG7 517 aa29.9■■■□□ 2.38
RHBDD3-203ENST00000413137 PNMA3Q9UL41 463 aa29.9■■■□□ 2.38
RHBDD3-203ENST00000413137 SMCHD1A6NHR9 2005 aa29.89■■■□□ 2.38
RHBDD3-203ENST00000413137 VPS37CA5D8V6 355 aaPredicted RBP29.89■■■□□ 2.38
RHBDD3-203ENST00000413137 PDCP20941 246 aa29.89■■■□□ 2.38
RHBDD3-203ENST00000413137 TM4SF4P48230 202 aa29.89■■■□□ 2.38
RHBDD3-203ENST00000413137 INHBEP58166 350 aa29.89■■■□□ 2.38
RHBDD3-203ENST00000413137 NPY5RQ15761 445 aa29.89■■■□□ 2.38
RHBDD3-203ENST00000413137 PHF20Q9BVI0 1012 aa29.89■■■□□ 2.38
RHBDD3-203ENST00000413137 CCPG1Q9ULG6 757 aa29.89■■■□□ 2.38
RHBDD3-203ENST00000413137 RIPK3Q9Y572 518 aa29.89■■■□□ 2.38
RHBDD3-203ENST00000413137 CTDP1Q9Y5B0 961 aaPredicted RBP29.89■■■□□ 2.38
RHBDD3-203ENST00000413137 WDR33Q9C0J8 1336 aaKnown RBP29.88■■■□□ 2.37
RHBDD3-203ENST00000413137 FDX1P10109 184 aa29.88■■■□□ 2.37
RHBDD3-203ENST00000413137 C1QTNF8P60827 252 aa29.88■■■□□ 2.37
RHBDD3-203ENST00000413137 SREBF2Q12772 1141 aa29.88■■■□□ 2.37
RHBDD3-203ENST00000413137 FOXD4L5Q5VV16 416 aaPredicted RBP29.88■■■□□ 2.37
RHBDD3-203ENST00000413137 FOXD4L4Q8WXT5 416 aaPredicted RBP29.88■■■□□ 2.37
RHBDD3-203ENST00000413137 PAGR1Q9BTK6 254 aa29.88■■■□□ 2.37
RHBDD3-203ENST00000413137 SH3GLB2Q9NR46 395 aa29.88■■■□□ 2.37
RHBDD3-203ENST00000413137 H3BQV1 296 aa29.87■■■□□ 2.37
RHBDD3-203ENST00000413137 IFFO2Q5TF58 517 aa29.87■■■□□ 2.37
RHBDD3-203ENST00000413137 OPLAHO14841 1288 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 NLRP5P59047 1200 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 PLS1Q14651 629 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 OXER1Q8TDS5 423 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 COL11A1P12107 1806 aaPredicted RBP29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 hCG_1984214I3L0E3 225 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 ATP2A1O14983 1001 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 MMP1P03956 469 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 TRIM29Q14134 588 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 Q3C1V9 767 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 SNRNP48Q6IEG0 339 aaKnown RBP29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 ZNF713Q8N859 430 aaPredicted RBP29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 MB21D1Q8N884 522 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 SMCR8Q8TEV9 937 aaPredicted RBP29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 PARK7Q99497 189 aaKnown RBP29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 R3HDMLQ9H3Y0 253 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 HOMER2Q9NSB8 354 aa29.86■■■□□ 2.37
RHBDD3-203ENST00000413137 A0A0G2JMZ2 1700 aa29.85■■■□□ 2.37
RHBDD3-203ENST00000413137 SMCO2A6NFE2 343 aa29.85■■■□□ 2.37
RHBDD3-203ENST00000413137 ALAS1P13196 640 aa29.85■■■□□ 2.37
RHBDD3-203ENST00000413137 XBP1P17861 261 aa29.85■■■□□ 2.37
RHBDD3-203ENST00000413137 OAZ1P54368 228 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms