RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 PIGSQ96S52 555 aa23.9■■□□□ 1.42
C4orf48-202ENST00000409860 TXNRD2Q9NNW7 524 aa23.9■■□□□ 1.42
C4orf48-202ENST00000409860 BTBD7Q9P203 1132 aa23.9■■□□□ 1.42
C4orf48-202ENST00000409860 ATP2A1O14983 1001 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 ZBTB5O15062 677 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 ERVK-9P63128 1117 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 ERVK-24P63145 666 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 CCNA1P78396 465 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 AKAP17AQ02040 695 aaKnown RBP23.89■■□□□ 1.41
C4orf48-202ENST00000409860 FUT2Q10981 343 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 NTRK3Q16288 839 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 QRICH1Q2TAL8 776 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 POTEEQ6S8J3 1075 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 CCDC83Q8IWF9 413 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 TRIM22Q8IYM9 498 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 CPXCR1Q8N123 301 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 PIBF1Q8WXW3 757 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 TEX13BQ9BXU2 312 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 SPATC1LQ9H0A9 340 aa23.89■■□□□ 1.41
C4orf48-202ENST00000409860 RAVER2Q9HCJ3 691 aaKnown RBP23.89■■□□□ 1.41
C4orf48-202ENST00000409860 RBM27Q9P2N5 1060 aaKnown RBP23.89■■□□□ 1.41
C4orf48-202ENST00000409860 RLFQ13129 1914 aa23.88■■□□□ 1.41
C4orf48-202ENST00000409860 PNMA6FA0A0J9YX94 578 aa23.88■■□□□ 1.41
C4orf48-202ENST00000409860 ICAM1P05362 532 aa23.88■■□□□ 1.41
C4orf48-202ENST00000409860 STAT3P40763 770 aa23.88■■□□□ 1.41
C4orf48-202ENST00000409860 R3HDMLQ9H3Y0 253 aa23.88■■□□□ 1.41
C4orf48-202ENST00000409860 ZNF214Q9UL59 606 aaPredicted RBP23.88■■□□□ 1.41
C4orf48-202ENST00000409860 CCPG1Q9ULG6 757 aa23.88■■□□□ 1.41
C4orf48-202ENST00000409860 K7ELQ4 463 aaPredicted RBP23.87■■□□□ 1.41
C4orf48-202ENST00000409860 PEX10O60683 326 aa23.87■■□□□ 1.41
C4orf48-202ENST00000409860 COPB2P35606 906 aa23.87■■□□□ 1.41
C4orf48-202ENST00000409860 SSRP1Q08945 709 aaKnown RBP23.87■■□□□ 1.41
C4orf48-202ENST00000409860 TRAF1Q13077 416 aa23.87■■□□□ 1.41
C4orf48-202ENST00000409860 SNRNP48Q6IEG0 339 aaKnown RBP23.87■■□□□ 1.41
C4orf48-202ENST00000409860 PHKBQ93100 1093 aa23.87■■□□□ 1.41
C4orf48-202ENST00000409860 SLC26A6Q9BXS9 759 aa23.87■■□□□ 1.41
C4orf48-202ENST00000409860 RNF26Q9BY78 433 aaPredicted RBP23.87■■□□□ 1.41
C4orf48-202ENST00000409860 V9GY48 417 aaPredicted RBP23.87■■□□□ 1.41
C4orf48-202ENST00000409860 A0A0G2JMZ2 1700 aa23.87■■□□□ 1.41
C4orf48-202ENST00000409860 PARP14Q460N5 1801 aa23.87■■□□□ 1.41
C4orf48-202ENST00000409860 ZNF536O15090 1300 aa23.86■■□□□ 1.41
C4orf48-202ENST00000409860 PRPF3O43395 683 aaKnown RBP23.86■■□□□ 1.41
C4orf48-202ENST00000409860 ST3GAL1Q11201 340 aa23.86■■□□□ 1.41
C4orf48-202ENST00000409860 FBXO11Q86XK2 927 aa23.86■■□□□ 1.41
C4orf48-202ENST00000409860 RIOX2Q8IUF8 465 aa23.86■■□□□ 1.41
C4orf48-202ENST00000409860 CCAR1Q8IX12 1150 aaKnown RBP23.86■■□□□ 1.41
C4orf48-202ENST00000409860 LLPHQ9BRT6 129 aaKnown RBP23.86■■□□□ 1.41
C4orf48-202ENST00000409860 AMNQ9BXJ7 453 aa23.86■■□□□ 1.41
C4orf48-202ENST00000409860 FMNL1O95466 1100 aaPredicted RBP23.85■■□□□ 1.41
C4orf48-202ENST00000409860 SLC25A27O95847 323 aa23.85■■□□□ 1.41
C4orf48-202ENST00000409860 SLC4A3P48751 1232 aa23.85■■□□□ 1.41
C4orf48-202ENST00000409860 Q3C1V9 767 aa23.85■■□□□ 1.41
C4orf48-202ENST00000409860 TKFCQ3LXA3 575 aa23.85■■□□□ 1.41
C4orf48-202ENST00000409860 AGBL1Q96MI9 1066 aa23.85■■□□□ 1.41
C4orf48-202ENST00000409860 MOV10L1Q9BXT6 1211 aaKnown RBP23.85■■□□□ 1.41
C4orf48-202ENST00000409860 hCG_1642624A0A1W2PR95 340 aa23.84■■□□□ 1.41
C4orf48-202ENST00000409860 GPR25O00155 361 aa23.84■■□□□ 1.41
C4orf48-202ENST00000409860 PPFIA3O75145 1194 aa23.84■■□□□ 1.41
C4orf48-202ENST00000409860 CTDNEP1O95476 244 aa23.84■■□□□ 1.41
C4orf48-202ENST00000409860 NOM1Q5C9Z4 860 aaKnown RBP23.84■■□□□ 1.41
C4orf48-202ENST00000409860 NSUN7Q8NE18 718 aaKnown RBP23.84■■□□□ 1.41
C4orf48-202ENST00000409860 SHCBP1Q8NEM2 672 aa23.84■■□□□ 1.41
C4orf48-202ENST00000409860 STK36Q9NRP7 1315 aa23.84■■□□□ 1.41
C4orf48-202ENST00000409860 PTPDC1A2A3K4 754 aa23.83■■□□□ 1.41
C4orf48-202ENST00000409860 ALAS1P13196 640 aa23.83■■□□□ 1.41
C4orf48-202ENST00000409860 SP3Q02447 781 aa23.83■■□□□ 1.41
C4orf48-202ENST00000409860 USH1GQ495M9 461 aa23.83■■□□□ 1.41
C4orf48-202ENST00000409860 NCAPG2Q86XI2 1143 aa23.83■■□□□ 1.41
C4orf48-202ENST00000409860 CWC22Q9HCG8 908 aaKnown RBP23.83■■□□□ 1.41
C4orf48-202ENST00000409860 PCDHA1Q9Y5I3 950 aa23.83■■□□□ 1.41
C4orf48-202ENST00000409860 ABCB11O95342 1321 aa23.83■■□□□ 1.4
C4orf48-202ENST00000409860 hCG_1984214I3L0E3 225 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 PPP1R11O60927 126 aaPredicted RBP23.82■■□□□ 1.4
C4orf48-202ENST00000409860 DEXIO95424 95 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 ERCC3P19447 782 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 MAPK4P31152 587 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 PFKFB3Q16875 520 aaPredicted RBP23.82■■□□□ 1.4
C4orf48-202ENST00000409860 WDR78Q5VTH9 848 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 HEATR3Q7Z4Q2 680 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 ZNF713Q8N859 430 aaPredicted RBP23.82■■□□□ 1.4
C4orf48-202ENST00000409860 CHST13Q8NET6 341 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 MROH8Q9H579 483 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 HOMER2Q9NSB8 354 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 RNF146Q9NTX7 359 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 ORC3Q9UBD5 711 aaPredicted RBP23.82■■□□□ 1.4
C4orf48-202ENST00000409860 FBXO40Q9UH90 709 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 TSKSQ9UJT2 592 aa23.82■■□□□ 1.4
C4orf48-202ENST00000409860 SCG2P13521 617 aa23.81■■□□□ 1.4
C4orf48-202ENST00000409860 HMGN5P82970 282 aaKnown RBP23.81■■□□□ 1.4
C4orf48-202ENST00000409860 BECN1Q14457 450 aa23.81■■□□□ 1.4
C4orf48-202ENST00000409860 KIF22Q14807 665 aa23.81■■□□□ 1.4
C4orf48-202ENST00000409860 WASF1Q92558 559 aa23.81■■□□□ 1.4
C4orf48-202ENST00000409860 TRERF1Q96PN7 1200 aa23.81■■□□□ 1.4
C4orf48-202ENST00000409860 PORCNQ9H237 461 aa23.81■■□□□ 1.4
C4orf48-202ENST00000409860 MRPL11Q9Y3B7 192 aaKnown RBP23.81■■□□□ 1.4
C4orf48-202ENST00000409860 RIPK3Q9Y572 518 aa23.81■■□□□ 1.4
C4orf48-202ENST00000409860 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.81■■□□□ 1.4
C4orf48-202ENST00000409860 JAK2O60674 1132 aa23.8■■□□□ 1.4
C4orf48-202ENST00000409860 FKTNO75072 461 aa23.8■■□□□ 1.4
C4orf48-202ENST00000409860 HSPA1AP0DMV8 641 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms