RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 WASHC4Q2M389 1173 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 NUDT18Q6ZVK8 323 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 RPAINQ86UA6 219 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 IRF2BP1Q8IU81 584 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 MMGT1Q8N4V1 131 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 CRACR2BQ8N4Y2 399 aaPredicted RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 NOA1Q8NC60 698 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 COG1Q8WTW3 980 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 CCDC12Q8WUD4 166 aaPredicted RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 PPM1EQ8WY54 764 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 FERMT2Q96AC1 680 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 PAGE5Q96GU1 130 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 CCDC34Q96HJ3 373 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 STRBPQ96SI9 672 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 CEP89Q96ST8 783 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 EIF3CQ99613 913 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 DESI2Q9BSY9 194 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 PHF20Q9BVI0 1012 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 IRX2Q9BZI1 471 aaPredicted RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 ESF1Q9H501 851 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 SERTAD1Q9UHV2 236 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 COL24A1Q17RW2 1714 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 XDHP47989 1333 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 PDS5AQ29RF7 1337 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 SYNRGQ9UMZ2 1314 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 SBF2Q86WG5 1849 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 FOCADQ5VW36 1801 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 RASSF10A6NK89 507 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 ERVV-2B6SEH9 535 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 ZNF213O14771 459 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 NPHP1O15259 732 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 ZBTB43O43298 467 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 BMP15O95972 392 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 ABL1P00519 1130 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 GCGRP47871 477 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 FNTAP49354 379 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 HERVK_113P62684 666 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 CTDSPL2Q05D32 466 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 AIMP1Q12904 312 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 SLC39A6Q13433 755 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 TTF1Q15361 905 aaPredicted RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 PKN1Q16512 942 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 FIGNQ5HY92 759 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 WDR59Q6PJI9 974 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 FOXR2Q6PJQ5 311 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 CYP26C1Q6V0L0 522 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 CERS3Q8IU89 383 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 SLC35F6Q8N357 371 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 IGSF22Q8N9C0 903 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 PUS3Q9BZE2 481 aaKnown RBP3.55□□□□□ -1.84
CUL3-204ENST00000409777 DENND2AQ9ULE3 1009 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 MYO6Q9UM54 1294 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 MYH7BA7E2Y1 1941 aa3.55□□□□□ -1.84
CUL3-204ENST00000409777 COL5A2P05997 1499 aaPredicted RBP3.54□□□□□ -1.84
CUL3-204ENST00000409777 A0A087WUV0 522 aaPredicted RBP3.54□□□□□ -1.84
CUL3-204ENST00000409777 A0A1W2PQJ5 194 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 CTAGE15A4D2H0 777 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 DEXIO95424 95 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 CTAGE8P0CG41 777 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 IARSP41252 1262 aaKnown RBP3.54□□□□□ -1.84
CUL3-204ENST00000409777 ZAP70P43403 619 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 GYS2P54840 703 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 EIF5P55010 431 aaKnown RBP3.54□□□□□ -1.84
CUL3-204ENST00000409777 ATP2C1P98194 919 aaPredicted RBP3.54□□□□□ -1.84
CUL3-204ENST00000409777 NNTQ13423 1086 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 KRT31Q15323 416 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 C9orf131Q5VYM1 1079 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 GBP6Q6ZN66 633 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 YTHDF3Q7Z739 585 aaKnown RBP3.54□□□□□ -1.84
CUL3-204ENST00000409777 CTAGE6Q86UF2 777 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 LAPTM4BQ86VI4 370 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 NPAS4Q8IUM7 802 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 CTAGE4Q8IX94 777 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 CNPY4Q8N129 248 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 MREGQ8N565 214 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 C4orf32Q8N8J7 132 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 CAVIN3Q969G5 261 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 MTRQ99707 1265 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 ZBED2Q9BTP6 218 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 RNF26Q9BY78 433 aaPredicted RBP3.54□□□□□ -1.84
CUL3-204ENST00000409777 FAM107BQ9H098 131 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 CNNM2Q9H8M5 875 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 PIH1D3Q9NQM4 214 aaKnown RBP3.54□□□□□ -1.84
CUL3-204ENST00000409777 CAPN11Q9UMQ6 739 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 CEP131Q9UPN4 1083 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 VGLL3A8MV65 326 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 CPLX1O14810 134 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 POLR2DO15514 142 aaKnown RBP3.54□□□□□ -1.84
CUL3-204ENST00000409777 ATP8B3O60423 1300 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 MYL6BP14649 208 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 CASP14P31944 242 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 GUCY1A2P33402 732 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 LMAN1P49257 510 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 SPAG1Q07617 926 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 DDR1Q08345 913 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 SSRP1Q08945 709 aaKnown RBP3.54□□□□□ -1.84
CUL3-204ENST00000409777 TCIRG1Q13488 830 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 KCNB1Q14721 858 aa3.54□□□□□ -1.84
CUL3-204ENST00000409777 KARSQ15046 597 aaKnown RBP3.54□□□□□ -1.84
CUL3-204ENST00000409777 TCP11X2Q5H9J9 407 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms