RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 APTXQ7Z2E3 356 aaKnown RBP17.23■□□□□ 0.35
LIMK2-204ENST00000406516 SRBD1Q8N5C6 995 aaKnown RBP17.23■□□□□ 0.35
LIMK2-204ENST00000406516 CNTNAP5Q8WYK1 1306 aa17.23■□□□□ 0.35
LIMK2-204ENST00000406516 ZC3H4Q9UPT8 1303 aaKnown RBP17.23■□□□□ 0.35
LIMK2-204ENST00000406516 IGSF22Q8N9C0 903 aa17.23■□□□□ 0.35
LIMK2-204ENST00000406516 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
LIMK2-204ENST00000406516 TNFRSF25Q93038 417 aa17.23■□□□□ 0.35
LIMK2-204ENST00000406516 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
LIMK2-204ENST00000406516 DDAH1O94760 285 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 BMP15O95972 392 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 BMS1Q14692 1282 aaKnown RBP17.22■□□□□ 0.35
LIMK2-204ENST00000406516 TBC1D22AQ8WUA7 517 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 EPC1Q9H2F5 836 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 BLZF1Q9H2G9 400 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 EFCAB8A8MWE9 144 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 KIF20AO95235 890 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 SCNN1DP51172 638 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 RBL2Q08999 1139 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 SLC4A8Q2Y0W8 1093 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 PIK3AP1Q6ZUJ8 805 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 PPFIBP1Q86W92 1011 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 ZNF526Q8TF50 670 aaPredicted RBP17.22■□□□□ 0.35
LIMK2-204ENST00000406516 MRPL44Q9H9J2 332 aaKnown RBP17.22■□□□□ 0.35
LIMK2-204ENST00000406516 FHOD1Q9Y613 1164 aa17.22■□□□□ 0.35
LIMK2-204ENST00000406516 PPP1R3GB7ZBB8 358 aa17.21■□□□□ 0.35
LIMK2-204ENST00000406516 MECOMQ03112 1051 aa17.21■□□□□ 0.35
LIMK2-204ENST00000406516 NSUN4Q96CB9 384 aaKnown RBP17.21■□□□□ 0.35
LIMK2-204ENST00000406516 GSDMAQ96QA5 445 aa17.21■□□□□ 0.35
LIMK2-204ENST00000406516 ARGLU1Q9NWB6 273 aaPredicted RBP17.21■□□□□ 0.35
LIMK2-204ENST00000406516 CTNND2Q9UQB3 1225 aa17.21■□□□□ 0.35
LIMK2-204ENST00000406516 FGRP09769 529 aa17.21■□□□□ 0.35
LIMK2-204ENST00000406516 CYP2D6P10635 497 aa17.21■□□□□ 0.35
LIMK2-204ENST00000406516 VEGFAP15692 232 aaPredicted RBP17.21■□□□□ 0.35
LIMK2-204ENST00000406516 MCM7P33993 719 aa17.21■□□□□ 0.35
LIMK2-204ENST00000406516 NLRP5P59047 1200 aa17.21■□□□□ 0.35
LIMK2-204ENST00000406516 FKBP1AP62942 108 aaKnown RBP17.21■□□□□ 0.35
LIMK2-204ENST00000406516 ATP2C1P98194 919 aaPredicted RBP17.21■□□□□ 0.35
LIMK2-204ENST00000406516 AGBL3Q8NEM8 1001 aa17.21■□□□□ 0.35
LIMK2-204ENST00000406516 IRX2Q9BZI1 471 aaPredicted RBP17.21■□□□□ 0.35
LIMK2-204ENST00000406516 ADD3Q9UEY8 706 aaKnown RBP17.21■□□□□ 0.35
LIMK2-204ENST00000406516 ADAMTS3O15072 1205 aa17.2■□□□□ 0.34
LIMK2-204ENST00000406516 CDKAL1Q5VV42 579 aa17.2■□□□□ 0.34
LIMK2-204ENST00000406516 TMCO3Q6UWJ1 677 aa17.2■□□□□ 0.34
LIMK2-204ENST00000406516 KIFC2Q96AC6 838 aa17.2■□□□□ 0.34
LIMK2-204ENST00000406516 LZTFL1Q9NQ48 299 aa17.2■□□□□ 0.34
LIMK2-204ENST00000406516 TTF2Q9UNY4 1162 aaKnown RBP17.2■□□□□ 0.34
LIMK2-204ENST00000406516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
LIMK2-204ENST00000406516 LDHBP07195 334 aaKnown RBP17.2■□□□□ 0.34
LIMK2-204ENST00000406516 CCDC175P0C221 793 aa17.2■□□□□ 0.34
LIMK2-204ENST00000406516 PCP11498 1178 aaKnown RBP17.2■□□□□ 0.34
LIMK2-204ENST00000406516 EPS15P42566 896 aa17.2■□□□□ 0.34
LIMK2-204ENST00000406516 MAP3K9P80192 1104 aa17.2■□□□□ 0.34
LIMK2-204ENST00000406516 PPP2R3AQ06190 1150 aa17.2■□□□□ 0.34
LIMK2-204ENST00000406516 TERF2Q15554 542 aa17.2■□□□□ 0.34
LIMK2-204ENST00000406516 PANX2Q96RD6 677 aa17.2■□□□□ 0.34
LIMK2-204ENST00000406516 DCP1AQ9NPI6 582 aaPredicted RBP17.2■□□□□ 0.34
LIMK2-204ENST00000406516 CNOT7Q9UIV1 285 aaKnown RBP17.2■□□□□ 0.34
LIMK2-204ENST00000406516 PNMA6AP0CW24 399 aaPredicted RBP17.19■□□□□ 0.34
LIMK2-204ENST00000406516 SCG2P13521 617 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 CCT6AP40227 531 aaKnown RBP17.19■□□□□ 0.34
LIMK2-204ENST00000406516 CT47A1Q5JQC4 288 aaPredicted RBP17.19■□□□□ 0.34
LIMK2-204ENST00000406516 RAD9BQ6WBX8 426 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 CCDC12Q8WUD4 166 aaPredicted RBP17.19■□□□□ 0.34
LIMK2-204ENST00000406516 PCDHAC2Q9Y5I4 1007 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 MRFAP1Q9Y605 127 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 A0A0U1RQJ8 604 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 POTECB2RU33 542 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 EGFRP00533 1210 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 USP17L8P0C7I0 530 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 DIXDC1Q155Q3 683 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 TEX35Q5T0J7 233 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 MICALL2Q8IY33 904 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 ATRIPQ8WXE1 791 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 ZNF646O15015 1829 aaPredicted RBP17.19■□□□□ 0.34
LIMK2-204ENST00000406516 MYO3BQ8WXR4 1341 aa17.19■□□□□ 0.34
LIMK2-204ENST00000406516 SEC31AO94979 1220 aaKnown RBP17.18■□□□□ 0.34
LIMK2-204ENST00000406516 RPS12P25398 132 aaKnown RBP17.18■□□□□ 0.34
LIMK2-204ENST00000406516 FILIP1LQ4L180 1135 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 IQUBQ8NA54 791 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 CTAGE1Q96RT6 745 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
LIMK2-204ENST00000406516 GPRC5DQ9NZD1 345 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 MYH13Q9UKX3 1938 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 TSPY2A6NKD2 308 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 ORC4O43929 436 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 CASP14P31944 242 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 PBX1P40424 430 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 E2F4Q16254 413 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 IL17AQ16552 155 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 RRAGBQ5VZM2 374 aa17.18■□□□□ 0.34
LIMK2-204ENST00000406516 MFAP3LO75121 409 aa17.17■□□□□ 0.34
LIMK2-204ENST00000406516 ZRANB2O95218 330 aaKnown RBP eCLIP17.17■□□□□ 0.34
LIMK2-204ENST00000406516 RBM26Q5T8P6 1007 aaKnown RBP17.17■□□□□ 0.34
LIMK2-204ENST00000406516 SAMD7Q7Z3H4 446 aa17.17■□□□□ 0.34
LIMK2-204ENST00000406516 CREBRFQ8IUR6 639 aa17.17■□□□□ 0.34
LIMK2-204ENST00000406516 L3MBTL3Q96JM7 780 aaPredicted RBP17.17■□□□□ 0.34
LIMK2-204ENST00000406516 ADGRG1Q9Y653 693 aa17.17■□□□□ 0.34
LIMK2-204ENST00000406516 SPTY2D1Q68D10 685 aaPredicted RBP17.17■□□□□ 0.34
LIMK2-204ENST00000406516 MTRQ99707 1265 aa17.17■□□□□ 0.34
LIMK2-204ENST00000406516 SUGT1Q9Y2Z0 365 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms