RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 BAG3O95817 575 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 CD44P16070 742 aaKnown RBP12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 BMP6P22004 513 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 TECP42680 631 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 RASSF7Q02833 373 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 SLC9C1Q4G0N8 1177 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 CCDC84Q86UT8 332 aaPredicted RBP12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 TRIM31Q9BZY9 425 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 GOLGA8KD6RF30 607 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 ZNF185O15231 689 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 PRPF3O43395 683 aaKnown RBP12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 GNA11P29992 359 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 CEP85LQ5SZL2 805 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 CCDC43Q96MW1 224 aaKnown RBP12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 ISCA1Q9BUE6 129 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 LCMT1Q9UIC8 334 aa12.36□□□□□ -0.43
CSGALNACT1-202ENST00000397998 CEP104O60308 925 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 GOLGA8HP0CJ92 632 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 TMX4Q9H1E5 349 aaPredicted RBP12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 ANKZF1Q9H8Y5 726 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 POLD4Q9HCU8 107 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 RIPOR2Q9Y4F9 1068 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 NF2P35240 595 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 NELFCDQ8IXH7 590 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 COG1Q8WTW3 980 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 STAG1Q8WVM7 1258 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 SAP30BPQ9UHR5 308 aaKnown RBP12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 FAM184BQ9ULE4 1060 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 ZBED6P86452 979 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 CHRNDQ07001 517 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 PDCLQ13371 301 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 TADA2BQ86TJ2 420 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 PNMA1Q8ND90 353 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 KIFC2Q96AC6 838 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 RRP36Q96EU6 259 aaKnown RBP12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 PSD3Q9NYI0 1048 aa12.35□□□□□ -0.43
CSGALNACT1-202ENST00000397998 PP2D1A8MPX8 630 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 ZNF18P17022 549 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 MAP2K1Q02750 393 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 NONOQ15233 471 aaKnown RBP eCLIP12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 IFI16Q16666 785 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 KRT26Q7Z3Y9 468 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 ENAHQ8N8S7 591 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 SELENOSQ9BQE4 189 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 EPB41L4AQ9HCS5 686 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 LGALS16A8MUM7 142 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 EIF4A3P38919 411 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 ERVK-24P63145 666 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 CCDC24Q8N4L8 307 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 HNRNPLLQ8WVV9 542 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 P2RX5Q93086 422 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 CABS1Q96KC9 395 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 LRRC27Q9C0I9 530 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 EPB41L5Q9HCM4 733 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 DIP2AQ14689 1571 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 PPP1R2P41236 205 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 NTRK3Q16288 839 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 FAM169AQ9Y6X4 670 aa12.34□□□□□ -0.43
CSGALNACT1-202ENST00000397998 DIP2BQ9P265 1576 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 LRRIQ3A6PVS8 624 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ZNF76P36508 570 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 TRAPPC10P48553 1259 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 EPHB4P54760 987 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CASP7P55210 303 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 EHHADHQ08426 723 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 KLHL30Q0D2K2 578 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 DPYDQ12882 1025 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 TBX2Q13207 712 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 SNX29Q8TEQ0 813 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 PLCD4Q9BRC7 762 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 PPP1R12BO60237 982 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 MAP2K2P36507 400 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ARHGAP25P42331 645 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ALX1Q15699 326 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 KRT12Q99456 494 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 MLXIPQ9HAP2 919 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 A6NNZ2 444 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 NMT2O60551 498 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 DDAH1O94760 285 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 HEXIM1O94992 359 aaKnown RBP12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 GBP2P32456 591 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 TUBB8Q3ZCM7 444 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 FOXR1Q6PIV2 292 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 DISC1Q9NRI5 854 aa12.33□□□□□ -0.44
CSGALNACT1-202ENST00000397998 GCOM1H8Y6P7 765 aaPredicted RBP12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 MYZAPP0CAP1 466 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 KIAA0753Q2KHM9 967 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 DCAF17Q5H9S7 520 aaPredicted RBP12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 SFMBT2Q5VUG0 894 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 BIN2Q9UBW5 565 aaPredicted RBP12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 SMCO2A6NFE2 343 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 PPP1R3GB7ZBB8 358 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 KCNK3O14649 394 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 LDHCP07864 332 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 IFT88Q13099 833 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 NNTQ13423 1086 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CCDC170Q8IYT3 715 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 FNBP4Q8N3X1 1017 aaPredicted RBP12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 AGPAT5Q9NUQ2 364 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms