RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.71■□□□□ 0.59
TRIM39-205ENST00000396551 V9GYY5 206 aaPredicted RBP18.71■□□□□ 0.59
TRIM39-205ENST00000396551 FRMPD2Q68DX3 1309 aaPredicted RBP18.71■□□□□ 0.59
TRIM39-205ENST00000396551 LAD1O00515 517 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 TUBB4AP04350 444 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 PAK1Q13153 545 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 CCDC12Q8WUD4 166 aaPredicted RBP18.7■□□□□ 0.58
TRIM39-205ENST00000396551 IGKV6D-41A0A0C4DH26 115 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 SLU7O95391 586 aaKnown RBP18.7■□□□□ 0.58
TRIM39-205ENST00000396551 PRCPP42785 496 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 NONOQ15233 471 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRIM39-205ENST00000396551 NELFBQ8WX92 580 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 C6orf50Q9HD87 102 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 RMND1Q9NWS8 449 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 PHLPP2Q6ZVD8 1323 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 KLRC4O43908 158 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 RBL2Q08999 1139 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 KRT31Q15323 416 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 DOK7Q18PE1 504 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 LETM2Q2VYF4 491 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 LRRC47Q8N1G4 583 aaKnown RBP18.7■□□□□ 0.58
TRIM39-205ENST00000396551 IGSF22Q8N9C0 903 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 ERO1AQ96HE7 468 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 CTAGE1Q96RT6 745 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 LIMA1Q9UHB6 759 aaKnown RBP18.7■□□□□ 0.58
TRIM39-205ENST00000396551 DNAI1Q9UI46 699 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 MAPK8IP1Q9UQF2 711 aa18.7■□□□□ 0.58
TRIM39-205ENST00000396551 AKR1B15C9JRZ8 316 aaPredicted RBP18.69■□□□□ 0.58
TRIM39-205ENST00000396551 UBA7P41226 1012 aa18.69■□□□□ 0.58
TRIM39-205ENST00000396551 LRRN4CLQ8ND94 238 aa18.69■□□□□ 0.58
TRIM39-205ENST00000396551 SEC63Q9UGP8 760 aaKnown RBP18.69■□□□□ 0.58
TRIM39-205ENST00000396551 TTF2Q9UNY4 1162 aaKnown RBP18.69■□□□□ 0.58
TRIM39-205ENST00000396551 SUGT1Q9Y2Z0 365 aa18.69■□□□□ 0.58
TRIM39-205ENST00000396551 ZSCAN12O43309 604 aa18.69■□□□□ 0.58
TRIM39-205ENST00000396551 CCNT1O60563 726 aaKnown RBP18.69■□□□□ 0.58
TRIM39-205ENST00000396551 DPP8Q6V1X1 898 aaPredicted RBP18.69■□□□□ 0.58
TRIM39-205ENST00000396551 KBTBD4Q9NVX7 518 aa18.69■□□□□ 0.58
TRIM39-205ENST00000396551 OR52Z1P0C646 297 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 GNA11P29992 359 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 CCT6AP40227 531 aaKnown RBP18.68■□□□□ 0.58
TRIM39-205ENST00000396551 EIF6P56537 245 aaKnown RBP18.68■□□□□ 0.58
TRIM39-205ENST00000396551 MTF1Q14872 753 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 COL23A1Q86Y22 540 aaPredicted RBP18.68■□□□□ 0.58
TRIM39-205ENST00000396551 ZC3H12CQ9C0D7 883 aaKnown RBP18.68■□□□□ 0.58
TRIM39-205ENST00000396551 TMEM260Q9NX78 707 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 GREB1LQ9C091 1923 aaPredicted RBP18.68■□□□□ 0.58
TRIM39-205ENST00000396551 SCNN1DP51172 638 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 PANX2Q96RD6 677 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 BIN2Q9UBW5 565 aaPredicted RBP18.68■□□□□ 0.58
TRIM39-205ENST00000396551 LRRC10BA6NIK2 292 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 SNHG28P0DPA3 235 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 KMT5BQ4FZB7 885 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 NEK8Q86SG6 692 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 RASSF8Q8NHQ8 419 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 TBCKQ8TEA7 893 aa18.68■□□□□ 0.58
TRIM39-205ENST00000396551 ESYT2A0FGR8 921 aa18.67■□□□□ 0.58
TRIM39-205ENST00000396551 FILIP1LQ4L180 1135 aa18.67■□□□□ 0.58
TRIM39-205ENST00000396551 SOGA3Q5TF21 947 aa18.67■□□□□ 0.58
TRIM39-205ENST00000396551 JAKMIP3Q5VZ66 844 aa18.67■□□□□ 0.58
TRIM39-205ENST00000396551 ADSSL1Q8N142 457 aa18.67■□□□□ 0.58
TRIM39-205ENST00000396551 USP40Q9NVE5 1235 aa18.67■□□□□ 0.58
TRIM39-205ENST00000396551 NPR1P16066 1061 aa18.67■□□□□ 0.58
TRIM39-205ENST00000396551 CPLX3Q8WVH0 158 aa18.67■□□□□ 0.58
TRIM39-205ENST00000396551 DESI2Q9BSY9 194 aa18.67■□□□□ 0.58
TRIM39-205ENST00000396551 MYH4Q9Y623 1939 aa18.67■□□□□ 0.58
TRIM39-205ENST00000396551 TRIM49BA6NDI0 452 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 SOWAHDA6NJG2 315 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 PLCG1P19174 1290 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 KCNB1Q14721 858 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 CABP7Q86V35 215 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 COA7Q96BR5 231 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 EDIL3O43854 480 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 GYPCP04921 128 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 SLURP2P0DP57 97 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 SHMT1P34896 483 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 COPB1P53618 953 aaKnown RBP18.66■□□□□ 0.58
TRIM39-205ENST00000396551 PMS1P54277 932 aaKnown RBP18.66■□□□□ 0.58
TRIM39-205ENST00000396551 TCP11X2Q5H9J9 407 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 IRF2BP1Q8IU81 584 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 VPS16Q9H269 839 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 TAB2Q9NYJ8 693 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 MFAP3LO75121 409 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 ELF2Q15723 593 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 ASPRV1Q53RT3 343 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 CDC42EP5Q6NZY7 148 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 PPFIBP1Q86W92 1011 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 REXO1Q8N1G1 1221 aaKnown RBP18.66■□□□□ 0.58
TRIM39-205ENST00000396551 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 AK8Q96MA6 479 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.66■□□□□ 0.58
TRIM39-205ENST00000396551 ITIH6Q6UXX5 1313 aa18.66■□□□□ 0.58
TRIM39-205ENST00000396551 KCNJ18B7U540 433 aa18.65■□□□□ 0.58
TRIM39-205ENST00000396551 CASP14P31944 242 aa18.65■□□□□ 0.58
TRIM39-205ENST00000396551 FXR1P51114 621 aaKnown RBP eCLIP18.65■□□□□ 0.58
TRIM39-205ENST00000396551 KCNJ12Q14500 433 aa18.65■□□□□ 0.58
TRIM39-205ENST00000396551 RAD9BQ6WBX8 426 aa18.65■□□□□ 0.58
TRIM39-205ENST00000396551 POTEDQ86YR6 584 aa18.65■□□□□ 0.58
TRIM39-205ENST00000396551 NLGN1Q8N2Q7 840 aa18.65■□□□□ 0.58
TRIM39-205ENST00000396551 GPCPD1Q9NPB8 672 aa18.65■□□□□ 0.58
TRIM39-205ENST00000396551 SERPINB13Q9UIV8 391 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms