RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, human

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB-208	ENST00000396389	RRP1B	Q14684	758 aa	Known RBP	11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	NFXL1	Q6ZNB6	911 aa		11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	SRL	Q86TD4	932 aa		11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	NUP133	Q8WUM0	1156 aa		11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	DCPS	Q96C86	337 aa	Known RBP	11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	CNTNAP1	P78357	1384 aa		11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	LOC102724159	A0A0B4J2E5	919 aa		11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	IFIT3	O14879	490 aa	Known RBP	11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	SLC3A2	P08195	630 aa	Known RBP	11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	AKR1B1	P15121	316 aa		11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	HDLBP	Q00341	1268 aa	Known RBP	11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	MKRN3	Q13064	507 aa	Known RBP	11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	PWP2	Q15269	919 aa	Known RBP	11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	TOGARAM2	Q6ZUX3	1019 aa		11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	CREBRF	Q8IUR6	639 aa		11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	SULF1	Q8IWU6	871 aa		11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	FBXO18	Q8NFZ0	1043 aa		11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	DHX58	Q96C10	678 aa		11.66	□□□□□ -0.54
TUBB-208	ENST00000396389	PDE4B	Q07343	736 aa		11.65	□□□□□ -0.54
TUBB-208	ENST00000396389	GRM1	Q13255	1194 aa		11.65	□□□□□ -0.54
TUBB-208	ENST00000396389	LONRF2	Q1L5Z9	754 aa		11.65	□□□□□ -0.54
TUBB-208	ENST00000396389	MICU3	Q86XE3	530 aa		11.65	□□□□□ -0.54
TUBB-208	ENST00000396389	ZNF202	O95125	648 aa		11.65	□□□□□ -0.54
TUBB-208	ENST00000396389	GTF2A1	P52655	376 aa	Predicted RBP	11.65	□□□□□ -0.54
TUBB-208	ENST00000396389	STK38	Q15208	465 aa		11.65	□□□□□ -0.54
TUBB-208	ENST00000396389	TMEM67	Q5HYA8	995 aa		11.65	□□□□□ -0.54
TUBB-208	ENST00000396389	UBAC1	Q9BSL1	405 aa		11.65	□□□□□ -0.54
TUBB-208	ENST00000396389	PPP2R2C	Q9Y2T4	447 aa		11.65	□□□□□ -0.54
TUBB-208	ENST00000396389	PHLPP2	Q6ZVD8	1323 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	SBF1	O95248	1867 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	MTF1	Q14872	753 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	SART3	Q15020	963 aa	Known RBP	11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	PACS2	Q86VP3	889 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	LRRC47	Q8N1G4	583 aa	Known RBP	11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	SMARCC2	Q8TAQ2	1214 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	DRC1	Q96MC2	740 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	CPVL	Q9H3G5	476 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	PI4KB	Q9UBF8	816 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	DOCK2	Q92608	1830 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	hCG_1642624	A0A1W2PR95	340 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	GH2	P01242	217 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	SPICE1	Q8N0Z3	855 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	ZNF396	Q96N95	335 aa	Predicted RBP	11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	IDI2	Q9BXS1	227 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	MYH7	P12883	1935 aa		11.64	□□□□□ -0.55
TUBB-208	ENST00000396389	NRDC	O43847	1150 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	RASA1	P20936	1047 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	INPP5B	P32019	993 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	DHX32	Q7L7V1	743 aa	Known RBP	11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	FANCL	Q9NW38	375 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	TNKS	O95271	1327 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	FDPS	P14324	419 aa	Known RBP	11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	SHMT1	P34896	483 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	ACTN2	P35609	894 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	MAP3K9	P80192	1104 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	ALX1	Q15699	326 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	E2F4	Q16254	413 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	FAM151A	Q8WW52	585 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	ESR2	Q92731	530 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	ZBED3	Q96IU2	234 aa	Predicted RBP	11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	FAN1	Q9Y2M0	1017 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	GOLGA8H	P0CJ92	632 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	VEGFA	P15692	232 aa	Predicted RBP	11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	PNOC	Q13519	176 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	SEPT2	Q15019	361 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	CERKL	Q49MI3	558 aa	Predicted RBP	11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	ADAL	Q6DHV7	355 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	GPR161	Q8N6U8	529 aa	Known RBP	11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	LINC00301	Q8NCQ3	95 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	GOLGA5	Q8TBA6	731 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	STAG1	Q8WVM7	1258 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	CEP95	Q96GE4	821 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	LZTFL1	Q9NQ48	299 aa		11.63	□□□□□ -0.55
TUBB-208	ENST00000396389	KLF18	A0A0U1RQI7	1052 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	UBE2Q2L	H0YL09	131 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	PFKFB2	O60825	505 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	ECM2	O94769	699 aa	Predicted RBP	11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	TOP1	P11387	765 aa	Known RBP	11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	TNNI2	P48788	182 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	NLRP12	P59046	1061 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	KRT32	Q14532	448 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	TEPSIN	Q96N21	525 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	WRNIP1	Q96S55	665 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	MRI	Q9BWK5	157 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	IL17RB	Q9NRM6	502 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	IQCA1L	A6NCM1	817 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	RHOXF2B	P0C7M4	288 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	RSRC2	Q7L4I2	434 aa	Known RBP	11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	TMEM139	Q8IV31	216 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	PNKP	Q96T60	521 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	RHOXF2	Q9BQY4	288 aa		11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	RNF41	Q9H4P4	317 aa	Predicted RBP	11.62	□□□□□ -0.55
TUBB-208	ENST00000396389	INTS13	Q9NVM9	706 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms