RNA–Protein interactions for RNA: ENST00000396384.1

TUBB-207, Transcript of tubulin beta class I, humanhuman

TSL 3 BASIC

Gene TUBB, Length 2,823 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-207ENST00000396384 USP17L12C9JPN9 530 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 USP17L21D6R901 530 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 GTPBP6O43824 516 aaPredicted RBP11.73□□□□□ -0.53
TUBB-207ENST00000396384 PCP11498 1178 aaKnown RBP11.73□□□□□ -0.53
TUBB-207ENST00000396384 SPAG1Q07617 926 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 KCNJ12Q14500 433 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 MCM6Q14566 821 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 IL17AQ16552 155 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 CTR9Q6PD62 1173 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 NELFBQ8WX92 580 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 PNKPQ96T60 521 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 NAPGQ99747 312 aaPredicted RBP11.73□□□□□ -0.53
TUBB-207ENST00000396384 MAPK8IP1Q9UQF2 711 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 LEMD3Q9Y2U8 911 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 CNTNAP5Q8WYK1 1306 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 NMT2O60551 498 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 ERLIN1O75477 346 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 TFRCP02786 760 aaKnown RBP11.73□□□□□ -0.53
TUBB-207ENST00000396384 RHOXF2BP0C7M4 288 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 KRT9P35527 623 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 BEND6Q5SZJ8 279 aaPredicted RBP11.73□□□□□ -0.53
TUBB-207ENST00000396384 ZNF658Q5TYW1 1059 aaPredicted RBP11.73□□□□□ -0.53
TUBB-207ENST00000396384 HDXQ7Z353 690 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 MSANTD4Q8NCY6 345 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 MASTLQ96GX5 879 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 RHOXF2Q9BQY4 288 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
TUBB-207ENST00000396384 POLLQ9UGP5 575 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 ADAM21Q9UKJ8 722 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 RAB21Q9UL25 225 aa11.73□□□□□ -0.53
TUBB-207ENST00000396384 MYH2Q9UKX2 1941 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 H0YIN7 160 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 H3BQF6 201 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 RPN1P04843 607 aaKnown RBP11.72□□□□□ -0.53
TUBB-207ENST00000396384 FGRP09769 529 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 SCG2P13521 617 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 USP5P45974 858 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 TRAPPC10P48553 1259 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 UBXN1Q04323 297 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 TRIM14Q14142 442 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 UPF1Q92900 1129 aaKnown RBP eCLIP11.72□□□□□ -0.536e-8■■□□□ 11.7
TUBB-207ENST00000396384 SLF1Q9BQI6 1058 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 RMND1Q9NWS8 449 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 DUOX1Q9NRD9 1551 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 CTAGE15A4D2H0 777 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 CTAGE8P0CG41 777 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 FAM47AQ5JRC9 791 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 CTAGE6Q86UF2 777 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 CTAGE4Q8IX94 777 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 TBC1D16Q8TBP0 767 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 MYO1AQ9UBC5 1043 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 GGA1Q9UJY5 639 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
TUBB-207ENST00000396384 ATP6V0A2Q9Y487 856 aa11.72□□□□□ -0.53
TUBB-207ENST00000396384 C6orf229H3BNL8 230 aa11.71□□□□□ -0.53
TUBB-207ENST00000396384 VEGFAP15692 232 aaPredicted RBP11.71□□□□□ -0.53
TUBB-207ENST00000396384 ALDH1B1P30837 517 aa11.71□□□□□ -0.53
TUBB-207ENST00000396384 ARHGAP25P42331 645 aa11.71□□□□□ -0.53
TUBB-207ENST00000396384 PRCPP42785 496 aa11.71□□□□□ -0.53
TUBB-207ENST00000396384 EVX2Q03828 476 aa11.71□□□□□ -0.53
TUBB-207ENST00000396384 R3HDM1Q15032 1099 aaKnown RBP11.71□□□□□ -0.53
TUBB-207ENST00000396384 WHAMMP3Q1A5X7 153 aa11.71□□□□□ -0.53
TUBB-207ENST00000396384 SP8Q8IXZ3 490 aa11.71□□□□□ -0.53
TUBB-207ENST00000396384 PDE11AQ9HCR9 933 aa11.71□□□□□ -0.53
TUBB-207ENST00000396384 ABCB6Q9NP58 842 aa11.71□□□□□ -0.53
TUBB-207ENST00000396384 GDAQ9Y2T3 454 aa11.71□□□□□ -0.53
TUBB-207ENST00000396384 ADAMTS3O15072 1205 aa11.71□□□□□ -0.54
TUBB-207ENST00000396384 ZBTB22O15209 634 aa11.71□□□□□ -0.54
TUBB-207ENST00000396384 PFKFB3Q16875 520 aaPredicted RBP11.71□□□□□ -0.54
TUBB-207ENST00000396384 ZNF384Q8TF68 577 aa11.71□□□□□ -0.54
TUBB-207ENST00000396384 ZBTB9Q96C00 473 aa11.71□□□□□ -0.54
TUBB-207ENST00000396384 L1RE1Q9UN81 338 aa11.71□□□□□ -0.54
TUBB-207ENST00000396384 MAST2Q6P0Q8 1798 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 RIMBP2O15034 1052 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 STAT6P42226 847 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 EXOC4Q96A65 974 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 CHP1Q99653 195 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 SUGCTQ9HAC7 445 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 MYO6Q9UM54 1294 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 EPN1Q9Y6I3 576 aaPredicted RBP11.7□□□□□ -0.54
TUBB-207ENST00000396384 H7C1D1 291 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 PES1O00541 588 aaKnown RBP11.7□□□□□ -0.54
TUBB-207ENST00000396384 EIF3JO75822 258 aaKnown RBP11.7□□□□□ -0.54
TUBB-207ENST00000396384 ATP2B4P23634 1241 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 LONP1P36776 959 aaKnown RBP11.7□□□□□ -0.54
TUBB-207ENST00000396384 LMAN1P49257 510 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
TUBB-207ENST00000396384 ARL6IP4Q66PJ3 421 aaKnown RBP11.7□□□□□ -0.54
TUBB-207ENST00000396384 WWC2Q6AWC2 1192 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 GUCA1BQ9UMX6 200 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 MYH8P13535 1937 aa11.7□□□□□ -0.54
TUBB-207ENST00000396384 BAZ2BQ9UIF8 2168 aaKnown RBP11.69□□□□□ -0.54
TUBB-207ENST00000396384 ORC4O43929 436 aa11.69□□□□□ -0.54
TUBB-207ENST00000396384 NDUFA10O95299 355 aa11.69□□□□□ -0.54
TUBB-207ENST00000396384 PARP1P09874 1014 aaKnown RBP11.69□□□□□ -0.54
TUBB-207ENST00000396384 VSNL1P62760 191 aa11.69□□□□□ -0.54
TUBB-207ENST00000396384 SLC16A10Q8TF71 515 aa11.69□□□□□ -0.54
TUBB-207ENST00000396384 TRERF1Q96PN7 1200 aa11.69□□□□□ -0.54
TUBB-207ENST00000396384 VPS18Q9P253 973 aa11.69□□□□□ -0.54
TUBB-207ENST00000396384 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms