RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 PAGR1Q9BTK6 254 aa9.87□□□□□ -0.83
HERC4-203ENST00000395185 SIPA1L1O43166 1804 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 MYPNQ86TC9 1320 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 ADGRA2Q96PE1 1338 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 MYH1P12882 1939 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 A0A1W2PRG0 241 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 ERICH2A1L162 156 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 FLOT1O75955 427 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 DDAH1O94760 285 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 CDC27P30260 824 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 UBXN2AP68543 259 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 FGD1P98174 961 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 IFIT1BQ5T764 474 aaKnown RBP9.86□□□□□ -0.83
HERC4-203ENST00000395185 ZNF654Q8IZM8 581 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 HS6ST3Q8IZP7 471 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 SPICE1Q8N0Z3 855 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 PDCD7Q8N8D1 485 aaKnown RBP9.86□□□□□ -0.83
HERC4-203ENST00000395185 FANCBQ8NB91 859 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 NSUN7Q8NE18 718 aaKnown RBP9.86□□□□□ -0.83
HERC4-203ENST00000395185 NAV1Q8NEY1 1877 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 ARHGAP39Q9C0H5 1083 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 SLKQ9H2G2 1235 aaPredicted RBP9.86□□□□□ -0.83
HERC4-203ENST00000395185 RBPJLQ9UBG7 517 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 MORF4L1Q9UBU8 362 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 SLC12A7Q9Y666 1083 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 IVNS1ABPQ9Y6Y0 642 aa9.86□□□□□ -0.83
HERC4-203ENST00000395185 PALM3A6NDB9 673 aaPredicted RBP9.85□□□□□ -0.83
HERC4-203ENST00000395185 F5H6K3 240 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 ZBTB43O43298 467 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 CALM1P0DP23 149 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 CALM2P0DP24 149 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 CALM3P0DP25 149 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 FDPSP14324 419 aaKnown RBP9.85□□□□□ -0.83
HERC4-203ENST00000395185 IFNAR1P17181 557 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 SMARCA1P28370 1054 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 GRK4P32298 578 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 ADD1P35611 737 aaKnown RBP9.85□□□□□ -0.83
HERC4-203ENST00000395185 FLT3LGP49771 235 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 ERVK-9P63128 1117 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 ERVK-24P63145 666 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 KLRC3Q07444 240 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 WDR78Q5VTH9 848 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 LBX2Q6XYB7 198 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 NOL8Q76FK4 1167 aaKnown RBP9.85□□□□□ -0.83
HERC4-203ENST00000395185 CCDC83Q8IWF9 413 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 TRMT44Q8IYL2 757 aaKnown RBP9.85□□□□□ -0.83
HERC4-203ENST00000395185 SLAIN1Q8ND83 568 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 ARMC5Q96C12 935 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 NUDT12Q9BQG2 462 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 SCUBE2Q9NQ36 999 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 ISY1Q9ULR0 285 aaKnown RBP9.85□□□□□ -0.83
HERC4-203ENST00000395185 STX8Q9UNK0 236 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.85□□□□□ -0.83
HERC4-203ENST00000395185 PTCH2Q9Y6C5 1203 aa9.85□□□□□ -0.83
HERC4-203ENST00000395185 LAMB1P07942 1786 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 CCDC69A6NI79 296 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 GOLGA8BA8MQT2 603 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 STRNO43815 780 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 DHX16O60231 1041 aaKnown RBP9.84□□□□□ -0.83
HERC4-203ENST00000395185 ADCY3O60266 1144 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 ZBED4O75132 1171 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 CAPN2P17655 700 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 CCT2P78371 535 aaKnown RBP9.84□□□□□ -0.83
HERC4-203ENST00000395185 PRKCZQ05513 592 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 IRF5Q13568 498 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 PLS1Q14651 629 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 GRM4Q14833 912 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 SLC35G1Q2M3R5 365 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 SLFN13Q68D06 897 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 PLEKHH3Q7Z736 793 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 CATIPQ7Z7H3 387 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 PRPF38AQ8NAV1 312 aaKnown RBP9.84□□□□□ -0.83
HERC4-203ENST00000395185 PNMA1Q8ND90 353 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 PXYLP1Q8TE99 480 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 CHURC1Q8WUH1 139 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 SOCS4Q8WXH5 440 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 NCOA5Q9HCD5 579 aaKnown RBP9.84□□□□□ -0.83
HERC4-203ENST00000395185 SLC5A4Q9NY91 659 aa9.84□□□□□ -0.83
HERC4-203ENST00000395185 GREB1LQ9C091 1923 aaPredicted RBP9.84□□□□□ -0.83
HERC4-203ENST00000395185 CCDC196A0A1B0GTZ2 297 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 SLC25A27O95847 323 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 FDX1P10109 184 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 PDIA4P13667 645 aaKnown RBP9.83□□□□□ -0.84
HERC4-203ENST00000395185 COPB2P35606 906 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 METAP2P50579 478 aaKnown RBP eCLIP9.83□□□□□ -0.84
HERC4-203ENST00000395185 RTN1Q16799 776 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 Q3C1V9 767 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 SYNE3Q6ZMZ3 975 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 NFXL1Q6ZNB6 911 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 TMTC3Q6ZXV5 915 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 GMCL1P1Q8NEA9 526 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 MYL10Q9BUA6 226 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 MROH8Q9H579 483 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 KAT14Q9H8E8 782 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 MAD2L2Q9UI95 211 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 FEM1BQ9UK73 627 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 ZDHHC9Q9Y397 364 aa9.83□□□□□ -0.84
HERC4-203ENST00000395185 SPDYE16A6NNV3 312 aaPredicted RBP9.82□□□□□ -0.84
HERC4-203ENST00000395185 GOLGA8AA7E2F4 631 aa9.82□□□□□ -0.84
HERC4-203ENST00000395185 JAK2O60674 1132 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms