RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ITIH3Q06033 890 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 SPA17Q15506 151 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 SPTY2D1Q68D10 685 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 GIMAP8Q8ND71 665 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 CRACR2AQ9BSW2 395 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 NIP7Q9Y221 180 aaKnown RBP eCLIP11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 SLIT2O94813 1529 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 TTC26A0AVF1 554 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 A6NNZ2 444 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 USP17L12C9JPN9 530 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 USP17L21D6R901 530 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 PES1O00541 588 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 TRIM21P19474 475 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 KIF5AQ12840 1032 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 TUBB8Q3ZCM7 444 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 COBLL1Q53SF7 1204 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 CLEC4GQ6UXB4 293 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 ADGRA1Q86SQ6 560 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 TRIM58Q8NG06 486 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 CAGE1Q8TC20 777 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 ZNF507Q8TCN5 953 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 AFAP1L1Q8TED9 768 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 PODXL2Q9NZ53 605 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 BAZ2AQ9UIF9 1905 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 CASZ1Q86V15 1759 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 DOT1LQ8TEK3 1739 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 CAMTA2O94983 1202 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 CCNE1P24864 410 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 SF3B3Q15393 1217 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 SRLQ86TD4 932 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 ANKS1AQ92625 1134 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 STAMQ92783 540 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 BTG4Q9NY30 223 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 FEZ2Q9UHY8 353 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 FAN1Q9Y2M0 1017 aa11.24□□□□□ -0.61
UBE2D3-208ENST00000394803 KIAA1551Q9HCM1 1747 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 ABCB11O95342 1321 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 TNNT3P45378 269 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 CNNM4Q6P4Q7 775 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 ARHGAP27Q6ZUM4 889 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 CSGALNACT2Q8N6G5 542 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 CCDC155Q8N6L0 562 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 C4orf32Q8N8J7 132 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 TUBGCP2Q9BSJ2 902 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 ANKRD2Q9GZV1 360 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 ZNF287Q9HBT7 754 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 KBTBD4Q9NVX7 518 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 TMEM51Q9NW97 253 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 CCDC88AQ3V6T2 1871 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 ROBO1Q9Y6N7 1651 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 hCG_1642624A0A1W2PR95 340 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 NUTM2BA6NNL0 878 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 NUTM2EB1AL46 878 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 TACC1O75410 805 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 ADAMTS2O95450 1211 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 PRLRP16471 622 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 CRKLP46109 303 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 VAV2P52735 878 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 TBC1D8BQ0IIM8 1120 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 NCAPH2Q6IBW4 605 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 INTS5Q6P9B9 1019 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 KRT25Q7Z3Z0 450 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 CERS3Q8IU89 383 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 COG1Q8WTW3 980 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 SECISBP2LQ93073 1101 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 P2RX5Q93086 422 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 MTRQ99707 1265 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 LRRC27Q9C0I9 530 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 DCP1AQ9NPI6 582 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 GDAQ9Y2T3 454 aa11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 RRP15Q9Y3B9 282 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-208ENST00000394803 UBAP1LF5GYI3 381 aa11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 MYO1CO00159 1063 aa11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 SNAP23O00161 211 aa11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 GYG1P46976 350 aa11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 DYNLL1P63167 89 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 GRM4Q14833 912 aa11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 TTI2Q6NXR4 508 aa11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 NOA1Q8NC60 698 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 NSUN4Q96CB9 384 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 ALS2CR12Q96Q35 445 aa11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 ERGIC2Q96RQ1 377 aa11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 CHP1Q99653 195 aa11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 REXO2Q9Y3B8 237 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 JRKLQ9Y4A0 524 aa11.22□□□□□ -0.61
UBE2D3-208ENST00000394803 A0A0U1RQJ8 604 aa11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 WNT7AO00755 349 aa11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 RNF40O75150 1001 aa11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 CLSTN1O94985 981 aa11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 ATP6V1AP38606 617 aa11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 MTIF2P46199 727 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 HERVK_113P62684 666 aa11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 IL17AQ16552 155 aa11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 GBP6Q6ZN66 633 aa11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 CCDC84Q86UT8 332 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 IRF2BP1Q8IU81 584 aa11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 ATRIPQ8WXE1 791 aa11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 SMARCC1Q92922 1105 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 PCMTD1Q96MG8 357 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 FAM204AQ9H8W3 233 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms