RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 DEPDC1Q5TB30 811 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 ACTN1P12814 892 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 STAT2P52630 851 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 HDAC1Q13547 482 aaPredicted RBP14.59□□□□□ -0.07
USP49-203ENST00000394253 RTEL1Q9NZ71 1219 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 EHBP1L1Q8N3D4 1523 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 BFSP1Q12934 665 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 EPAS1Q99814 870 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 MIS18AQ9NYP9 233 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 FMNL1O95466 1100 aaPredicted RBP14.59□□□□□ -0.07
USP49-203ENST00000394253 RARS2Q5T160 578 aaKnown RBP14.59□□□□□ -0.07
USP49-203ENST00000394253 ATP6V1E2Q96A05 226 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 MID2Q9UJV3 735 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 ZBTB21Q9ULJ3 1066 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 SAT1P21673 171 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 ADCK1Q86TW2 530 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 ESYT1Q9BSJ8 1104 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 GCNT3O95395 438 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 TNNC2P02585 160 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 POSTNQ15063 836 aa14.59□□□□□ -0.07
USP49-203ENST00000394253 TTC41PQ6P2S7 1318 aa14.58□□□□□ -0.07
USP49-203ENST00000394253 HEXIM1O94992 359 aaKnown RBP14.58□□□□□ -0.07
USP49-203ENST00000394253 SLFN14P0C7P3 912 aa14.58□□□□□ -0.07
USP49-203ENST00000394253 TYW1BQ6NUM6 668 aa14.58□□□□□ -0.07
USP49-203ENST00000394253 SYTL2Q9HCH5 934 aa14.58□□□□□ -0.07
USP49-203ENST00000394253 ST13P5Q8NFI4 369 aaPredicted RBP14.58□□□□□ -0.08
USP49-203ENST00000394253 CNGB3Q9NQW8 809 aa14.58□□□□□ -0.08
USP49-203ENST00000394253 PRPF6O94906 941 aaKnown RBP14.58□□□□□ -0.08
USP49-203ENST00000394253 HSPA6P17066 643 aa14.58□□□□□ -0.08
USP49-203ENST00000394253 NCAPG2Q86XI2 1143 aa14.58□□□□□ -0.08
USP49-203ENST00000394253 INTUQ9ULD6 942 aa14.58□□□□□ -0.08
USP49-203ENST00000394253 STAMBPL1Q96FJ0 436 aa14.58□□□□□ -0.08
USP49-203ENST00000394253 PARP1P09874 1014 aaKnown RBP14.58□□□□□ -0.08
USP49-203ENST00000394253 EPHB4P54760 987 aa14.58□□□□□ -0.08
USP49-203ENST00000394253 OCRLQ01968 901 aa14.58□□□□□ -0.08
USP49-203ENST00000394253 ESRRAP11474 423 aaPredicted RBP14.58□□□□□ -0.08
USP49-203ENST00000394253 ST13P50502 369 aaKnown RBP14.58□□□□□ -0.08
USP49-203ENST00000394253 ACBD5Q5T8D3 534 aaPredicted RBP14.58□□□□□ -0.08
USP49-203ENST00000394253 TRIM45Q9H8W5 580 aaPredicted RBP14.58□□□□□ -0.08
USP49-203ENST00000394253 ZNF212Q9UDV6 495 aa14.58□□□□□ -0.08
USP49-203ENST00000394253 KRT14P02533 472 aa14.58□□□□□ -0.08
USP49-203ENST00000394253 SDSP20132 328 aa14.58□□□□□ -0.08
USP49-203ENST00000394253 EIF3BP55884 814 aaKnown RBP14.58□□□□□ -0.08
USP49-203ENST00000394253 ARHGEF35A5YM69 484 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 CHUKO15111 745 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 KRR1Q13601 381 aaKnown RBP14.57□□□□□ -0.08
USP49-203ENST00000394253 ZNF804AQ7Z570 1209 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 LUZP2Q86TE4 346 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.57□□□□□ -0.08
USP49-203ENST00000394253 KLC2Q9H0B6 622 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 NDE1Q9NXR1 346 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 MYO1AQ9UBC5 1043 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 RALGAPBQ86X10 1494 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 TMEM245Q9H330 911 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 CUTAO60888 179 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 MAML1Q92585 1016 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 PGBD1Q96JS3 809 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 MYH8P13535 1937 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 CAPRIN2Q6IMN6 1127 aaKnown RBP14.57□□□□□ -0.08
USP49-203ENST00000394253 ASPSCR1Q9BZE9 553 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 PRG3Q9Y2Y8 225 aaPredicted RBP14.57□□□□□ -0.08
USP49-203ENST00000394253 HNRNPRO43390 633 aaKnown RBP14.57□□□□□ -0.08
USP49-203ENST00000394253 PPARDQ03181 441 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 ANO5Q75V66 913 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 NBPF14Q5TI25 921 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 TMCC1O94876 653 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 ZNF202O95125 648 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 SUN2Q9UH99 717 aa14.57□□□□□ -0.08
USP49-203ENST00000394253 C4orf50Q6ZRC1 276 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 MBD2Q9UBB5 411 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 MAP3K2Q9Y2U5 619 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 KDM3AQ9Y4C1 1321 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 NLRP12P59046 1061 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 E2F4Q16254 413 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 CRLF3Q8IUI8 442 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 C19orf60Q96EN9 201 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 TLK1Q9UKI8 766 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 KDM2BQ8NHM5 1336 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 SMCO2A6NFE2 343 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 NOP56O00567 594 aaKnown RBP14.56□□□□□ -0.08
USP49-203ENST00000394253 HIF1AQ16665 826 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 MPRIPQ6WCQ1 1025 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 IPO5O00410 1097 aaKnown RBP14.56□□□□□ -0.08
USP49-203ENST00000394253 SERPINB1P30740 379 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 GOLGA8FQ08AF8 430 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 GOLGA8DPQ0D2H9 430 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 MORF4L2Q15014 288 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 DHX32Q7L7V1 743 aaKnown RBP14.56□□□□□ -0.08
USP49-203ENST00000394253 NELFBQ8WX92 580 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 USP26Q9BXU7 913 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 FSCBQ5H9T9 825 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 GYG2O15488 501 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 PDE6CP51160 858 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 COPB1P53618 953 aaKnown RBP14.56□□□□□ -0.08
USP49-203ENST00000394253 NOSTRINQ8IVI9 506 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 KLHL31Q9H511 634 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 AP1B1Q10567 949 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 MTX1Q13505 466 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 TRIM71Q2Q1W2 868 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms