RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 AKAP17AQ02040 695 aaKnown RBP22.4■■□□□ 1.18
PSEN1-203ENST00000394157 BECN1Q14457 450 aa22.4■■□□□ 1.18
PSEN1-203ENST00000394157 CDC37Q16543 378 aaPredicted RBP22.4■■□□□ 1.18
PSEN1-203ENST00000394157 SLC35G1Q2M3R5 365 aa22.4■■□□□ 1.18
PSEN1-203ENST00000394157 CCDC83Q8IWF9 413 aa22.4■■□□□ 1.18
PSEN1-203ENST00000394157 CPVLQ9H3G5 476 aa22.4■■□□□ 1.18
PSEN1-203ENST00000394157 VAT1LQ9HCJ6 419 aa22.4■■□□□ 1.18
PSEN1-203ENST00000394157 MORF4L1Q9UBU8 362 aa22.4■■□□□ 1.18
PSEN1-203ENST00000394157 STK36Q9NRP7 1315 aa22.39■■□□□ 1.18
PSEN1-203ENST00000394157 PNMA6FA0A0J9YX94 578 aa22.39■■□□□ 1.17
PSEN1-203ENST00000394157 FMNL1O95466 1100 aaPredicted RBP22.39■■□□□ 1.17
PSEN1-203ENST00000394157 SSRP1Q08945 709 aaKnown RBP22.39■■□□□ 1.17
PSEN1-203ENST00000394157 CRHR2Q13324 411 aa22.39■■□□□ 1.17
PSEN1-203ENST00000394157 CUL4AQ13619 759 aa22.39■■□□□ 1.17
PSEN1-203ENST00000394157 CMTR1Q8N1G2 835 aaKnown RBP22.39■■□□□ 1.17
PSEN1-203ENST00000394157 CCDC82Q8N4S0 544 aa22.39■■□□□ 1.17
PSEN1-203ENST00000394157 REPS2Q8NFH8 660 aa22.39■■□□□ 1.17
PSEN1-203ENST00000394157 RBPJLQ9UBG7 517 aa22.39■■□□□ 1.17
PSEN1-203ENST00000394157 hCG_1984214I3L0E3 225 aa22.38■■□□□ 1.17
PSEN1-203ENST00000394157 ICAM1P05362 532 aa22.38■■□□□ 1.17
PSEN1-203ENST00000394157 COPB2P35606 906 aa22.38■■□□□ 1.17
PSEN1-203ENST00000394157 ST3GAL1Q11201 340 aa22.38■■□□□ 1.17
PSEN1-203ENST00000394157 FAM110CQ1W6H9 321 aa22.38■■□□□ 1.17
PSEN1-203ENST00000394157 ZNF713Q8N859 430 aaPredicted RBP22.38■■□□□ 1.17
PSEN1-203ENST00000394157 PIGSQ96S52 555 aa22.38■■□□□ 1.17
PSEN1-203ENST00000394157 BEGAINQ9BUH8 593 aa22.38■■□□□ 1.17
PSEN1-203ENST00000394157 TEX13BQ9BXU2 312 aa22.38■■□□□ 1.17
PSEN1-203ENST00000394157 RNF186Q9NXI6 227 aa22.38■■□□□ 1.17
PSEN1-203ENST00000394157 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.38■■□□□ 1.17
PSEN1-203ENST00000394157 V9GY48 417 aaPredicted RBP22.38■■□□□ 1.17
PSEN1-203ENST00000394157 ANP32AP39687 249 aaKnown RBP22.37■■□□□ 1.17
PSEN1-203ENST00000394157 CCNA1P78396 465 aa22.37■■□□□ 1.17
PSEN1-203ENST00000394157 HMGN5P82970 282 aaKnown RBP22.37■■□□□ 1.17
PSEN1-203ENST00000394157 TMEM132BQ14DG7 1078 aa22.37■■□□□ 1.17
PSEN1-203ENST00000394157 QRICH1Q2TAL8 776 aa22.37■■□□□ 1.17
PSEN1-203ENST00000394157 NSUN7Q8NE18 718 aaKnown RBP22.37■■□□□ 1.17
PSEN1-203ENST00000394157 GPRC5AQ8NFJ5 357 aa22.37■■□□□ 1.17
PSEN1-203ENST00000394157 WASF1Q92558 559 aa22.37■■□□□ 1.17
PSEN1-203ENST00000394157 INTS4Q96HW7 963 aaKnown RBP22.37■■□□□ 1.17
PSEN1-203ENST00000394157 AMNQ9BXJ7 453 aa22.37■■□□□ 1.17
PSEN1-203ENST00000394157 SLC26A6Q9BXS9 759 aa22.37■■□□□ 1.17
PSEN1-203ENST00000394157 ZNF214Q9UL59 606 aaPredicted RBP22.37■■□□□ 1.17
PSEN1-203ENST00000394157 DEXIO95424 95 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 CTDNEP1O95476 244 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 SLC25A27O95847 323 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 BCRP11274 1271 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 STAT3P40763 770 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 ERVK-9P63128 1117 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 ERVK-24P63145 666 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 TKFCQ3LXA3 575 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 POTEEQ6S8J3 1075 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 C17orf99Q6UX52 265 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 FBXO11Q86XK2 927 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 HOMER1Q86YM7 354 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 FAM177A1Q8N128 213 aaPredicted RBP22.36■■□□□ 1.17
PSEN1-203ENST00000394157 SMARCC2Q8TAQ2 1214 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 PHKBQ93100 1093 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 SPATC1LQ9H0A9 340 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 TSHZ2Q9NRE2 1034 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 BTBD7Q9P203 1132 aa22.36■■□□□ 1.17
PSEN1-203ENST00000394157 ZNF536O15090 1300 aa22.35■■□□□ 1.17
PSEN1-203ENST00000394157 PTPDC1A2A3K4 754 aa22.35■■□□□ 1.17
PSEN1-203ENST00000394157 TRPA1O75762 1119 aa22.35■■□□□ 1.17
PSEN1-203ENST00000394157 CNMDO75829 334 aa22.35■■□□□ 1.17
PSEN1-203ENST00000394157 PFKFB3Q16875 520 aaPredicted RBP22.35■■□□□ 1.17
PSEN1-203ENST00000394157 NOM1Q5C9Z4 860 aaKnown RBP22.35■■□□□ 1.17
PSEN1-203ENST00000394157 CCDC174Q6PII3 467 aa22.35■■□□□ 1.17
PSEN1-203ENST00000394157 RIOX2Q8IUF8 465 aa22.35■■□□□ 1.17
PSEN1-203ENST00000394157 ANKRD13CQ8N6S4 541 aa22.35■■□□□ 1.17
PSEN1-203ENST00000394157 SHCBP1Q8NEM2 672 aa22.35■■□□□ 1.17
PSEN1-203ENST00000394157 PAGR1Q9BTK6 254 aa22.35■■□□□ 1.17
PSEN1-203ENST00000394157 TXNRD2Q9NNW7 524 aa22.35■■□□□ 1.17
PSEN1-203ENST00000394157 KIF3AQ9Y496 699 aa22.35■■□□□ 1.17
PSEN1-203ENST00000394157 COL11A1P12107 1806 aaPredicted RBP22.34■■□□□ 1.17
PSEN1-203ENST00000394157 SCG2P13521 617 aa22.34■■□□□ 1.17
PSEN1-203ENST00000394157 CPXCR1Q8N123 301 aa22.34■■□□□ 1.17
PSEN1-203ENST00000394157 JMYQ8N9B5 988 aa22.34■■□□□ 1.17
PSEN1-203ENST00000394157 MAF1Q9H063 256 aa22.34■■□□□ 1.17
PSEN1-203ENST00000394157 RAVER2Q9HCJ3 691 aaKnown RBP22.34■■□□□ 1.17
PSEN1-203ENST00000394157 WBP1LQ9NX94 342 aa22.34■■□□□ 1.17
PSEN1-203ENST00000394157 ORC3Q9UBD5 711 aaPredicted RBP22.34■■□□□ 1.17
PSEN1-203ENST00000394157 CCPG1Q9ULG6 757 aa22.34■■□□□ 1.17
PSEN1-203ENST00000394157 BAZ2BQ9UIF8 2168 aaKnown RBP22.33■■□□□ 1.17
PSEN1-203ENST00000394157 ABCB11O95342 1321 aa22.33■■□□□ 1.17
PSEN1-203ENST00000394157 PLS1Q14651 629 aa22.33■■□□□ 1.17
PSEN1-203ENST00000394157 SNRNP48Q6IEG0 339 aaKnown RBP22.33■■□□□ 1.17
PSEN1-203ENST00000394157 TEX2Q8IWB9 1127 aa22.33■■□□□ 1.17
PSEN1-203ENST00000394157 CCDC12Q8WUD4 166 aaPredicted RBP22.33■■□□□ 1.17
PSEN1-203ENST00000394157 FBXO40Q9UH90 709 aa22.33■■□□□ 1.17
PSEN1-203ENST00000394157 CPA4Q9UI42 421 aa22.33■■□□□ 1.17
PSEN1-203ENST00000394157 PCDHA1Q9Y5I3 950 aa22.33■■□□□ 1.17
PSEN1-203ENST00000394157 MYH6P13533 1939 aa22.32■■□□□ 1.16
PSEN1-203ENST00000394157 SNAP25P60880 206 aa22.32■■□□□ 1.16
PSEN1-203ENST00000394157 PKN1Q16512 942 aa22.32■■□□□ 1.16
PSEN1-203ENST00000394157 PPP1R18Q6NYC8 613 aa22.32■■□□□ 1.16
PSEN1-203ENST00000394157 CHST13Q8NET6 341 aa22.32■■□□□ 1.16
PSEN1-203ENST00000394157 PIBF1Q8WXW3 757 aa22.32■■□□□ 1.16
PSEN1-203ENST00000394157 AGBL1Q96MI9 1066 aa22.32■■□□□ 1.16
PSEN1-203ENST00000394157 MROH8Q9H579 483 aa22.32■■□□□ 1.16
PSEN1-203ENST00000394157 SH3GLB2Q9NR46 395 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms