RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 KIFC2Q96AC6 838 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 ZNF653Q96CK0 615 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 L3MBTL3Q96JM7 780 aaPredicted RBP12.61□□□□□ -0.39
LAMB1-203ENST00000393560 SNX27Q96L92 541 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 MEIS3Q99687 375 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 PAGR1Q9BTK6 254 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 OSBPL7Q9BZF2 842 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 DMAP1Q9NPF5 467 aaPredicted RBP12.61□□□□□ -0.39
LAMB1-203ENST00000393560 MAP3K5Q99683 1374 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 ADGRB2O60241 1585 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 GOLGA8AA7E2F4 631 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 AGPSO00116 658 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 PDHA1P08559 390 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 SDSP20132 328 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 ATP1A2P50993 1020 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 GSTM4Q03013 218 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 TAF11Q15544 211 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 ANKRD20A8PQ5CZ79 823 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 ESCO1Q5FWF5 840 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 AGAP9Q5VTM2 703 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 ABTB2Q8N961 1025 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.61□□□□□ -0.39
LAMB1-203ENST00000393560 KIFAP3Q92845 792 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 MAK16Q9BXY0 300 aaKnown RBP12.61□□□□□ -0.39
LAMB1-203ENST00000393560 MAP3K19Q56UN5 1328 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 MKRN4PQ13434 485 aaPredicted RBP12.61□□□□□ -0.39
LAMB1-203ENST00000393560 KRT27Q7Z3Y8 459 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 ATRIPQ8WXE1 791 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 RNF25Q96BH1 459 aaPredicted RBP12.61□□□□□ -0.39
LAMB1-203ENST00000393560 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 HYPKQ9NX55 129 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 HOXC10Q9NYD6 342 aa12.61□□□□□ -0.39
LAMB1-203ENST00000393560 CDK12Q9NYV4 1490 aaPredicted RBP12.6□□□□□ -0.39
LAMB1-203ENST00000393560 A0A087WWV3 80 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 VARSP26640 1264 aaKnown RBP12.6□□□□□ -0.39
LAMB1-203ENST00000393560 LMBRD2Q68DH5 695 aaPredicted RBP12.6□□□□□ -0.39
LAMB1-203ENST00000393560 TEX9Q8N6V9 391 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 LTV1Q96GA3 475 aaPredicted RBP12.6□□□□□ -0.39
LAMB1-203ENST00000393560 CHPF2Q9P2E5 772 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 CBFA2T2O43439 604 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 TFRCP02786 760 aaKnown RBP12.6□□□□□ -0.39
LAMB1-203ENST00000393560 COPB2P35606 906 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 SEC24CP53992 1094 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 PMS2P54278 862 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 CYP4A11Q02928 519 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 CFAP157Q5JU67 520 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 C6orf89Q6UWU4 347 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 BPHLQ86WA6 291 aaPredicted RBP12.6□□□□□ -0.39
LAMB1-203ENST00000393560 GPR101Q96P66 508 aaPredicted RBP12.6□□□□□ -0.39
LAMB1-203ENST00000393560 SUCLA2Q9P2R7 463 aaPredicted RBP12.6□□□□□ -0.39
LAMB1-203ENST00000393560 CARD8Q9Y2G2 431 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 PPP2R2CQ9Y2T4 447 aa12.6□□□□□ -0.39
LAMB1-203ENST00000393560 FOXO3O43524 673 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 ZNF132P52740 706 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 ANKRD20A2Q5SQ80 823 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 ANKRD20A1Q5TYW2 823 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 GKAP1Q5VSY0 366 aaPredicted RBP12.59□□□□□ -0.39
LAMB1-203ENST00000393560 ANKRD20A3Q5VUR7 823 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 ANO7Q6IWH7 933 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 ANKRD13AQ8IZ07 590 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 CCHCR1Q8TD31 782 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 COG1Q8WTW3 980 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 RILPL2Q969X0 211 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 PUS3Q9BZE2 481 aaKnown RBP12.59□□□□□ -0.39
LAMB1-203ENST00000393560 CLSTN2Q9H4D0 955 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 HESX1Q9UBX0 185 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 HEY1Q9Y5J3 304 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 OVOS2A0A0J9YW53 1432 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 OVOS2Q6IE36 1432 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 ITIH6Q6UXX5 1313 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 SARSP49591 514 aaKnown RBP12.59□□□□□ -0.39
LAMB1-203ENST00000393560 AKAP17AQ02040 695 aaKnown RBP12.59□□□□□ -0.39
LAMB1-203ENST00000393560 TTC6Q86TZ1 520 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 WDR60Q8WVS4 1066 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 LZICQ8WZA0 190 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 FBXW7Q969H0 707 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 NAF1Q96HR8 494 aaKnown RBP12.59□□□□□ -0.39
LAMB1-203ENST00000393560 NEK1Q96PY6 1258 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 CCT8L2Q96SF2 557 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 EPN3Q9H201 632 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 PFDN4Q9NQP4 134 aa12.59□□□□□ -0.39
LAMB1-203ENST00000393560 MAGEC2Q9UBF1 373 aaPredicted RBP12.59□□□□□ -0.39
LAMB1-203ENST00000393560 ADAMTSL3P82987 1691 aa12.58□□□□□ -0.39
LAMB1-203ENST00000393560 LSP1P33241 339 aa12.58□□□□□ -0.4
LAMB1-203ENST00000393560 RFC5P40937 340 aa12.58□□□□□ -0.4
LAMB1-203ENST00000393560 ARHGEF6Q15052 776 aa12.58□□□□□ -0.4
LAMB1-203ENST00000393560 MAATS1Q7Z4T9 603 aa12.58□□□□□ -0.4
LAMB1-203ENST00000393560 SIX5Q8N196 739 aa12.58□□□□□ -0.4
LAMB1-203ENST00000393560 RPAP3Q9H6T3 665 aaPredicted RBP12.58□□□□□ -0.4
LAMB1-203ENST00000393560 ZMAT5Q9UDW3 170 aaKnown RBP12.58□□□□□ -0.4
LAMB1-203ENST00000393560 TMA7Q9Y2S6 64 aaKnown RBP12.58□□□□□ -0.4
LAMB1-203ENST00000393560 TARSL2A2RTX5 802 aaKnown RBP12.58□□□□□ -0.4
LAMB1-203ENST00000393560 KDM1AO60341 852 aa12.58□□□□□ -0.4
LAMB1-203ENST00000393560 USO1O60763 962 aaKnown RBP12.58□□□□□ -0.4
LAMB1-203ENST00000393560 VIMP08670 466 aaKnown RBP12.58□□□□□ -0.4
LAMB1-203ENST00000393560 MRPS35P82673 323 aaKnown RBP12.58□□□□□ -0.4
LAMB1-203ENST00000393560 KARSQ15046 597 aaKnown RBP12.58□□□□□ -0.4
LAMB1-203ENST00000393560 DUS1LQ6P1R4 473 aaKnown RBP12.58□□□□□ -0.4
LAMB1-203ENST00000393560 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
LAMB1-203ENST00000393560 TMEM154Q6P9G4 183 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms