RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SEMA3FQ13275 785 aa21.17■□□□□ 0.98
CBX1-202ENST00000393408 GIMAP8Q8ND71 665 aaPredicted RBP21.17■□□□□ 0.98
CBX1-202ENST00000393408 RHOXF2Q9BQY4 288 aa21.17■□□□□ 0.98
CBX1-202ENST00000393408 CAPN11Q9UMQ6 739 aa21.17■□□□□ 0.98
CBX1-202ENST00000393408 LUC7L2Q9Y383 392 aaKnown RBP21.17■□□□□ 0.98
CBX1-202ENST00000393408 VSNL1P62760 191 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 GPS2Q13227 327 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 RASSF8Q8NHQ8 419 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 TRIM10Q9UDY6 481 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 PSMA7O14818 248 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 UBA7P41226 1012 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 STIM1Q13586 685 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 INF2Q27J81 1249 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 GALNT17Q6IS24 598 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 TTI2Q6NXR4 508 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 WDR59Q6PJI9 974 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 CCDC148Q8NFR7 591 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 LRRC15Q8TF66 581 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 TRIM47Q96LD4 638 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 HAUS4Q9H6D7 363 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 GUCA1BQ9UMX6 200 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 JAG2Q9Y219 1238 aa21.16■□□□□ 0.98
CBX1-202ENST00000393408 PSMD14O00487 310 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 TXNRD3Q86VQ6 643 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 DZIP1Q86YF9 867 aaKnown RBP21.15■□□□□ 0.98
CBX1-202ENST00000393408 NOA1Q8NC60 698 aaKnown RBP21.15■□□□□ 0.98
CBX1-202ENST00000393408 DYNLL2Q96FJ2 89 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 PDE11AQ9HCR9 933 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 AHDC1Q5TGY3 1603 aaPredicted RBP21.15■□□□□ 0.98
CBX1-202ENST00000393408 ROBO3Q96MS0 1386 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 STXBP3O00186 592 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 LAD1O00515 517 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 CYTH3O43739 400 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 PRPHP41219 470 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 HERVK_113P62684 666 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 MCM6Q14566 821 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 NCAPH2Q6IBW4 605 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 TRAPPC11Q7Z392 1133 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 NOC3LQ8WTT2 800 aaKnown RBP21.15■□□□□ 0.98
CBX1-202ENST00000393408 EXOC4Q96A65 974 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 NLRP3Q96P20 1036 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 BARHL2Q9NY43 387 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 ADAM21Q9UKJ8 722 aa21.15■□□□□ 0.98
CBX1-202ENST00000393408 IRS2Q9Y4H2 1338 aa21.14■□□□□ 0.98
CBX1-202ENST00000393408 RGL2O15211 777 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 TUBBP07437 444 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 GYS2P54840 703 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 SPTY2D1Q68D10 685 aaPredicted RBP21.14■□□□□ 0.97
CBX1-202ENST00000393408 PLIN2Q99541 437 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 PSD3Q9NYI0 1048 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 USP17L3A6NCW0 530 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 USP17L4A6NCW7 530 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 ZBTB22O15209 634 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 DNM2P50570 870 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 USP17L1Q7RTZ2 530 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 HEATR3Q7Z4Q2 680 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 DHTKD1Q96HY7 919 aaPredicted RBP21.14■□□□□ 0.97
CBX1-202ENST00000393408 GBP3Q9H0R5 595 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 SUGCTQ9HAC7 445 aa21.14■□□□□ 0.97
CBX1-202ENST00000393408 MAGEC2Q9UBF1 373 aaPredicted RBP21.14■□□□□ 0.97
CBX1-202ENST00000393408 COL24A1Q17RW2 1714 aa21.13■□□□□ 0.97
CBX1-202ENST00000393408 PES1O00541 588 aaKnown RBP21.13■□□□□ 0.97
CBX1-202ENST00000393408 SRGNP10124 158 aa21.13■□□□□ 0.97
CBX1-202ENST00000393408 MEA1Q16626 185 aa21.13■□□□□ 0.97
CBX1-202ENST00000393408 CCDC178Q5BJE1 867 aa21.13■□□□□ 0.97
CBX1-202ENST00000393408 DUSP9Q99956 384 aaKnown RBP21.13■□□□□ 0.97
CBX1-202ENST00000393408 NYXQ9GZU5 481 aa21.13■□□□□ 0.97
CBX1-202ENST00000393408 TCP11L1Q9NUJ3 509 aa21.13■□□□□ 0.97
CBX1-202ENST00000393408 FLT1P17948 1338 aa21.13■□□□□ 0.97
CBX1-202ENST00000393408 TSR1Q2NL82 804 aaKnown RBP21.13■□□□□ 0.97
CBX1-202ENST00000393408 ZNF662Q6ZS27 426 aa21.13■□□□□ 0.97
CBX1-202ENST00000393408 TTYH3Q9C0H2 523 aa21.13■□□□□ 0.97
CBX1-202ENST00000393408 B4DLN1 442 aa21.12■□□□□ 0.97
CBX1-202ENST00000393408 SMIM5Q71RC9 77 aa21.12■□□□□ 0.97
CBX1-202ENST00000393408 CUEDC2Q9H467 287 aa21.12■□□□□ 0.97
CBX1-202ENST00000393408 MAGEF1Q9HAY2 307 aa21.12■□□□□ 0.97
CBX1-202ENST00000393408 MKNK2Q9HBH9 465 aa21.12■□□□□ 0.97
CBX1-202ENST00000393408 NAV1Q8NEY1 1877 aa21.12■□□□□ 0.97
CBX1-202ENST00000393408 PALM3A6NDB9 673 aaPredicted RBP21.12■□□□□ 0.97
CBX1-202ENST00000393408 EIF3JO75822 258 aaKnown RBP21.12■□□□□ 0.97
CBX1-202ENST00000393408 WDR93Q6P2C0 686 aa21.12■□□□□ 0.97
CBX1-202ENST00000393408 SH3RF3Q8TEJ3 882 aaPredicted RBP21.12■□□□□ 0.97
CBX1-202ENST00000393408 TUBGCP2Q9BSJ2 902 aa21.12■□□□□ 0.97
CBX1-202ENST00000393408 EXOC1Q9NV70 894 aa21.12■□□□□ 0.97
CBX1-202ENST00000393408 SPATA31A5Q5VU36 1347 aa21.11■□□□□ 0.97
CBX1-202ENST00000393408 SPATA31A7Q8IWB4 1347 aa21.11■□□□□ 0.97
CBX1-202ENST00000393408 SBF2Q86WG5 1849 aa21.11■□□□□ 0.97
CBX1-202ENST00000393408 TSPY3P0CV98 308 aa21.11■□□□□ 0.97
CBX1-202ENST00000393408 TSPY8P0CW00 308 aa21.11■□□□□ 0.97
CBX1-202ENST00000393408 PLCG1P19174 1290 aa21.11■□□□□ 0.97
CBX1-202ENST00000393408 KCNQ4P56696 695 aa21.11■□□□□ 0.97
CBX1-202ENST00000393408 MUM1L1Q5H9M0 696 aa21.11■□□□□ 0.97
CBX1-202ENST00000393408 CSGALNACT2Q8N6G5 542 aa21.11■□□□□ 0.97
CBX1-202ENST00000393408 CNTNAP4Q9C0A0 1308 aa21.11■□□□□ 0.97
CBX1-202ENST00000393408 RASSF10A6NK89 507 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 CASP8Q14790 479 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 CCDC122Q5T0U0 273 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 AK8Q96MA6 479 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 HDAC6Q9UBN7 1215 aa21.1■□□□□ 0.97
CBX1-202ENST00000393408 ENC1O14682 589 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms