RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 SHOXO15266 292 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 SASH1O94885 1247 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 ACRP10323 421 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 VAV1P15498 845 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 SYN1P17600 705 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 CYP4F8P98187 520 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 RAB3GAP1Q15042 981 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 VMACQ2NL98 169 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 LRRFIP1Q32MZ4 808 aaKnown RBP4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 RTP2Q5QGT7 225 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 RPTNQ6XPR3 784 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 FAM129CQ86XR2 697 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 SLITRK4Q8IW52 837 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 FEZF2Q8TBJ5 459 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 GIPC2Q8TF65 315 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 NKD1Q969G9 470 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 JMJD8Q96S16 334 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 DSCC1Q9BVC3 393 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 PRR13Q9NZ81 148 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 ACSL6Q9UKU0 697 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 PCDHA5Q9Y5H7 936 aa4.68□□□□□ -1.66
RNU6-1040P-201ENST00000383974 NCKAP1LP55160 1127 aa4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 TMEM62Q0P6H9 643 aa4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 PLEKHN1Q494U1 663 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 TDRD10Q5VZ19 366 aaKnown RBP4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 LDHDQ86WU2 507 aa4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 KIAA0825Q8IV33 1275 aa4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 C7orf61Q8IZ16 206 aa4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 TMEM52Q8NDY8 209 aa4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 EAF1Q96JC9 268 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 NT5C1AQ9BXI3 368 aa4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 SUCOQ9UBS9 1254 aaKnown RBP4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 ZNRF3Q9ULT6 936 aa4.67□□□□□ -1.66
RNU6-1040P-201ENST00000383974 GSNP06396 782 aa4.66□□□□□ -1.66
RNU6-1040P-201ENST00000383974 SP8Q8IXZ3 490 aa4.66□□□□□ -1.66
RNU6-1040P-201ENST00000383974 CCDC144CPQ8IYA2 1237 aa4.66□□□□□ -1.66
RNU6-1040P-201ENST00000383974 NAT16Q8N8M0 369 aa4.66□□□□□ -1.66
RNU6-1040P-201ENST00000383974 SYT8Q8NBV8 401 aa4.66□□□□□ -1.66
RNU6-1040P-201ENST00000383974 SPON2Q9BUD6 331 aa4.66□□□□□ -1.66
RNU6-1040P-201ENST00000383974 SLC12A9Q9BXP2 914 aa4.66□□□□□ -1.66
RNU6-1040P-201ENST00000383974 GZF1Q9H116 711 aaPredicted RBP4.66□□□□□ -1.66
RNU6-1040P-201ENST00000383974 H0Y8X5 98 aa4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 BUB1BO60566 1050 aaPredicted RBP4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 GSTM1P09488 218 aa4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 MSL3P1P0C860 447 aa4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 ZNF200P98182 395 aaPredicted RBP4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 MVKQ03426 396 aa4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 CBX2Q14781 532 aaPredicted RBP4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 SKOR2Q2VWA4 1001 aaPredicted RBP4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 ZNF326Q5BKZ1 582 aaKnown RBP4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 DCAF15Q66K64 600 aa4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 PPFIBP1Q86W92 1011 aa4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 ZDHHC14Q8IZN3 488 aa4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 LINC01356Q8N9X3 169 aa4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 CXorf38Q8TB03 319 aa4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 DHRS1Q96LJ7 313 aa4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 PWWP2AQ96N64 755 aa4.65□□□□□ -1.67
RNU6-1040P-201ENST00000383974 IGFBP6P24592 240 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1040P-201ENST00000383974 LIMS1P48059 325 aa4.64□□□□□ -1.67
RNU6-1040P-201ENST00000383974 MAPKAPK2P49137 400 aa4.64□□□□□ -1.67
RNU6-1040P-201ENST00000383974 PMS1P54277 932 aaKnown RBP4.64□□□□□ -1.67
RNU6-1040P-201ENST00000383974 INTS3Q68E01 1043 aaKnown RBP4.64□□□□□ -1.67
RNU6-1040P-201ENST00000383974 CWF19L1Q69YN2 538 aaKnown RBP4.64□□□□□ -1.67
RNU6-1040P-201ENST00000383974 ZC3H14Q6PJT7 736 aaKnown RBP4.64□□□□□ -1.67
RNU6-1040P-201ENST00000383974 ADAM7Q9H2U9 754 aa4.64□□□□□ -1.67
RNU6-1040P-201ENST00000383974 FAM86C1Q9NVL1 165 aa4.64□□□□□ -1.67
RNU6-1040P-201ENST00000383974 JAG2Q9Y219 1238 aa4.64□□□□□ -1.67
RNU6-1040P-201ENST00000383974 HCFC2Q9Y5Z7 792 aa4.64□□□□□ -1.67
RNU6-1040P-201ENST00000383974 A0A1W2PQ27 194 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 A0A1W2PQ64 194 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 A0A1W2PQC6 194 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 A0A1W2PQD8 194 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 FGF10O15520 208 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 DBHP09172 617 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 ZNF445P59923 1031 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 KRTAP10-2P60368 255 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 NR1I3Q14994 352 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 AXDND1Q5T1B0 1012 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 LDLRAD1Q5T700 205 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 HLA-DQA1Q5Y7H0 255 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 CYP2R1Q6VVX0 501 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 JAMLQ86YT9 394 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 TAB3Q8N5C8 712 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 TP53I13Q8NBR0 393 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 SMARCC1Q92922 1105 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 BRF1Q92994 677 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 SRRTQ9BXP5 876 aaKnown RBP4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 BCL11AQ9H165 835 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 LUC7LQ9NQ29 371 aaKnown RBP4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 PLA2G2DQ9UNK4 145 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 IRS2Q9Y4H2 1338 aa4.63□□□□□ -1.67
RNU6-1040P-201ENST00000383974 FFAR3O14843 346 aa4.62□□□□□ -1.67
RNU6-1040P-201ENST00000383974 SRGAP3O43295 1099 aa4.62□□□□□ -1.67
RNU6-1040P-201ENST00000383974 TP53P04637 393 aaPredicted RBP4.62□□□□□ -1.67
RNU6-1040P-201ENST00000383974 CELA3BP08861 270 aa4.62□□□□□ -1.67
RNU6-1040P-201ENST00000383974 IMPDH2P12268 514 aa4.62□□□□□ -1.67
RNU6-1040P-201ENST00000383974 FBLN1P23142 703 aa4.62□□□□□ -1.67
RNU6-1040P-201ENST00000383974 ZYXQ15942 572 aaKnown RBP4.62□□□□□ -1.67
RNU6-1040P-201ENST00000383974 NOL9Q5SY16 702 aaKnown RBP4.62□□□□□ -1.67
RNU6-1040P-201ENST00000383974 FIBCD1Q8N539 461 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms