RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 KRT25Q7Z3Z0 450 aa23.19■■□□□ 1.3
CPNE9-202ENST00000383831 CCDC84Q86UT8 332 aaPredicted RBP23.19■■□□□ 1.3
CPNE9-202ENST00000383831 GOPCQ9HD26 462 aa23.19■■□□□ 1.3
CPNE9-202ENST00000383831 CTAGE5O15320 804 aa23.19■■□□□ 1.3
CPNE9-202ENST00000383831 ZNF202O95125 648 aa23.19■■□□□ 1.3
CPNE9-202ENST00000383831 ATP2C1P98194 919 aaPredicted RBP23.19■■□□□ 1.3
CPNE9-202ENST00000383831 INF2Q27J81 1249 aa23.19■■□□□ 1.3
CPNE9-202ENST00000383831 SPECC1Q5M775 1068 aa23.19■■□□□ 1.3
CPNE9-202ENST00000383831 ZNF579Q8NAF0 562 aaKnown RBP23.19■■□□□ 1.3
CPNE9-202ENST00000383831 GLIS2Q9BZE0 524 aaPredicted RBP23.19■■□□□ 1.3
CPNE9-202ENST00000383831 GGA3Q9NZ52 723 aa23.19■■□□□ 1.3
CPNE9-202ENST00000383831 MCM7P33993 719 aa23.18■■□□□ 1.3
CPNE9-202ENST00000383831 IKQ13123 557 aaPredicted RBP23.18■■□□□ 1.3
CPNE9-202ENST00000383831 PTGDRQ13258 359 aa23.18■■□□□ 1.3
CPNE9-202ENST00000383831 SYDE2Q5VT97 1194 aa23.18■■□□□ 1.3
CPNE9-202ENST00000383831 BTNL9Q6UXG8 535 aa23.18■■□□□ 1.3
CPNE9-202ENST00000383831 BIN2Q9UBW5 565 aaPredicted RBP23.18■■□□□ 1.3
CPNE9-202ENST00000383831 CCDC192P0DO97 292 aa23.17■■□□□ 1.3
CPNE9-202ENST00000383831 SYKP43405 635 aa23.17■■□□□ 1.3
CPNE9-202ENST00000383831 C9orf131Q5VYM1 1079 aa23.17■■□□□ 1.3
CPNE9-202ENST00000383831 REXO1Q8N1G1 1221 aaKnown RBP23.17■■□□□ 1.3
CPNE9-202ENST00000383831 RNF214Q8ND24 703 aa23.17■■□□□ 1.3
CPNE9-202ENST00000383831 CSRNP2Q9H175 543 aa23.17■■□□□ 1.3
CPNE9-202ENST00000383831 VCPKMTQ9H867 229 aa23.17■■□□□ 1.3
CPNE9-202ENST00000383831 TMEM260Q9NX78 707 aa23.17■■□□□ 1.3
CPNE9-202ENST00000383831 UTRNP46939 3433 aa23.17■■□□□ 1.3
CPNE9-202ENST00000383831 TYRO3Q06418 890 aa23.17■■□□□ 1.3
CPNE9-202ENST00000383831 NONOQ15233 471 aaKnown RBP eCLIP23.17■■□□□ 1.3
CPNE9-202ENST00000383831 ZYXQ15942 572 aaKnown RBP23.17■■□□□ 1.3
CPNE9-202ENST00000383831 SH2D4AQ9H788 454 aa23.17■■□□□ 1.3
CPNE9-202ENST00000383831 RIC8AQ9NPQ8 531 aa23.17■■□□□ 1.3
CPNE9-202ENST00000383831 SNAP25P60880 206 aa23.16■■□□□ 1.3
CPNE9-202ENST00000383831 FAM83BQ5T0W9 1011 aa23.16■■□□□ 1.3
CPNE9-202ENST00000383831 PRAMEF18Q5VWM3 479 aa23.16■■□□□ 1.3
CPNE9-202ENST00000383831 JAKMIP3Q5VZ66 844 aa23.16■■□□□ 1.3
CPNE9-202ENST00000383831 FERMT2Q96AC1 680 aa23.16■■□□□ 1.3
CPNE9-202ENST00000383831 CTNND1O60716 968 aaKnown RBP23.15■■□□□ 1.3
CPNE9-202ENST00000383831 DCAF15Q66K64 600 aa23.15■■□□□ 1.3
CPNE9-202ENST00000383831 SDF4Q9BRK5 362 aa23.15■■□□□ 1.3
CPNE9-202ENST00000383831 KCNH3Q9ULD8 1083 aa23.15■■□□□ 1.3
CPNE9-202ENST00000383831 C4orf32Q8N8J7 132 aa23.14■■□□□ 1.3
CPNE9-202ENST00000383831 TIGD1Q96MW7 591 aa23.14■■□□□ 1.3
CPNE9-202ENST00000383831 ZNF341Q9BYN7 854 aa23.14■■□□□ 1.3
CPNE9-202ENST00000383831 GINM1Q9NU53 330 aa23.14■■□□□ 1.3
CPNE9-202ENST00000383831 FAM13BQ9NYF5 915 aa23.14■■□□□ 1.3
CPNE9-202ENST00000383831 PRR12Q9ULL5 1215 aa23.14■■□□□ 1.3
CPNE9-202ENST00000383831 LMOD1P29536 600 aaPredicted RBP23.14■■□□□ 1.29
CPNE9-202ENST00000383831 INPP5BP32019 993 aa23.14■■□□□ 1.29
CPNE9-202ENST00000383831 STAT2P52630 851 aa23.14■■□□□ 1.29
CPNE9-202ENST00000383831 SASS6Q6UVJ0 657 aa23.14■■□□□ 1.29
CPNE9-202ENST00000383831 PCDHA1Q9Y5I3 950 aa23.14■■□□□ 1.29
CPNE9-202ENST00000383831 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.13■■□□□ 1.29
CPNE9-202ENST00000383831 CLK2P49760 499 aaKnown RBP23.13■■□□□ 1.29
CPNE9-202ENST00000383831 UBE2SQ16763 222 aa23.13■■□□□ 1.29
CPNE9-202ENST00000383831 CUL5Q93034 780 aa23.13■■□□□ 1.29
CPNE9-202ENST00000383831 HOOK2Q96ED9 719 aa23.13■■□□□ 1.29
CPNE9-202ENST00000383831 PPP2R3BQ9Y5P8 575 aa23.13■■□□□ 1.29
CPNE9-202ENST00000383831 DOCK1Q14185 1865 aa23.13■■□□□ 1.29
CPNE9-202ENST00000383831 USP49Q70CQ1 688 aa23.12■■□□□ 1.29
CPNE9-202ENST00000383831 TBCKQ8TEA7 893 aa23.12■■□□□ 1.29
CPNE9-202ENST00000383831 ERCC4Q92889 916 aaPredicted RBP23.12■■□□□ 1.29
CPNE9-202ENST00000383831 FEZ1Q99689 392 aa23.12■■□□□ 1.29
CPNE9-202ENST00000383831 AMNQ9BXJ7 453 aa23.12■■□□□ 1.29
CPNE9-202ENST00000383831 PSTPIP2Q9H939 334 aa23.12■■□□□ 1.29
CPNE9-202ENST00000383831 ADARB2Q9NS39 739 aaKnown RBP23.12■■□□□ 1.29
CPNE9-202ENST00000383831 ZNF112Q9UJU3 913 aa23.12■■□□□ 1.29
CPNE9-202ENST00000383831 VWA3AA6NCI4 1184 aa23.12■■□□□ 1.29
CPNE9-202ENST00000383831 MRPL12P52815 198 aaKnown RBP23.12■■□□□ 1.29
CPNE9-202ENST00000383831 IL17AQ16552 155 aa23.12■■□□□ 1.29
CPNE9-202ENST00000383831 NEK8Q86SG6 692 aa23.12■■□□□ 1.29
CPNE9-202ENST00000383831 FBXO11Q86XK2 927 aa23.12■■□□□ 1.29
CPNE9-202ENST00000383831 SSC5DA1L4H1 1573 aa23.11■■□□□ 1.29
CPNE9-202ENST00000383831 LETM2Q2VYF4 491 aa23.11■■□□□ 1.29
CPNE9-202ENST00000383831 ARL6IP4Q66PJ3 421 aaKnown RBP23.11■■□□□ 1.29
CPNE9-202ENST00000383831 LONRF3Q496Y0 759 aa23.1■■□□□ 1.29
CPNE9-202ENST00000383831 EPSTI1Q96J88 318 aa23.1■■□□□ 1.29
CPNE9-202ENST00000383831 TMEM60Q9H2L4 133 aa23.1■■□□□ 1.29
CPNE9-202ENST00000383831 FZD1Q9UP38 647 aa23.1■■□□□ 1.29
CPNE9-202ENST00000383831 PITPNM2Q9BZ72 1349 aa23.1■■□□□ 1.29
CPNE9-202ENST00000383831 POLR2AP24928 1970 aaKnown RBP23.1■■□□□ 1.29
CPNE9-202ENST00000383831 PLA2G6O60733 806 aa23.09■■□□□ 1.29
CPNE9-202ENST00000383831 USH1GQ495M9 461 aa23.09■■□□□ 1.29
CPNE9-202ENST00000383831 KRBA2Q6ZNG9 492 aa23.09■■□□□ 1.29
CPNE9-202ENST00000383831 SCYL3Q8IZE3 742 aa23.09■■□□□ 1.29
CPNE9-202ENST00000383831 CHURC1Q8WUH1 139 aa23.09■■□□□ 1.29
CPNE9-202ENST00000383831 SYMPKQ92797 1274 aaKnown RBP23.09■■□□□ 1.29
CPNE9-202ENST00000383831 WRNIP1Q96S55 665 aa23.09■■□□□ 1.29
CPNE9-202ENST00000383831 POLR2DO15514 142 aaKnown RBP23.09■■□□□ 1.29
CPNE9-202ENST00000383831 CCNT1O60563 726 aaKnown RBP23.09■■□□□ 1.29
CPNE9-202ENST00000383831 TAL1P17542 331 aaPredicted RBP23.09■■□□□ 1.29
CPNE9-202ENST00000383831 ANO6Q4KMQ2 910 aa23.09■■□□□ 1.29
CPNE9-202ENST00000383831 KIFC2Q96AC6 838 aa23.09■■□□□ 1.29
CPNE9-202ENST00000383831 KIAA1683Q9H0B3 1180 aa23.09■■□□□ 1.29
CPNE9-202ENST00000383831 GLT8D2Q9H1C3 349 aa23.09■■□□□ 1.29
CPNE9-202ENST00000383831 KIAA1468Q9P260 1216 aa23.09■■□□□ 1.29
CPNE9-202ENST00000383831 FAM160B2Q86V87 743 aa23.08■■□□□ 1.29
CPNE9-202ENST00000383831 CNNM3Q8NE01 707 aa23.08■■□□□ 1.29
CPNE9-202ENST00000383831 ZKSCAN4Q969J2 545 aaPredicted RBP23.08■■□□□ 1.29
CPNE9-202ENST00000383831 FEM1BQ9UK73 627 aa23.08■■□□□ 1.29
CPNE9-202ENST00000383831 USP17L15C9J2P7 530 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms