RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 FAM71BQ8TC56 605 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 FOXP1Q9H334 677 aaPredicted RBP10.08□□□□□ -0.8
GPNMB-202ENST00000381990 TCP11L1Q9NUJ3 509 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 RSPH14Q9UHP6 348 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 TAOK2Q9UL54 1235 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 TTF2Q9UNY4 1162 aaKnown RBP10.08□□□□□ -0.8
GPNMB-202ENST00000381990 ADGRG1Q9Y653 693 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 FLT1P17948 1338 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 FOCADQ5VW36 1801 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 MYH1P12882 1939 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 CTAGE9A4FU28 777 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 PLEKHA8P1O95397 391 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 XBP1P17861 261 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 DOK7Q18PE1 504 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 WHAMMP3Q1A5X7 153 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 RASGRP2Q7LDG7 609 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 PPFIBP1Q86W92 1011 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 DIS3L2Q8IYB7 885 aaKnown RBP10.08□□□□□ -0.8
GPNMB-202ENST00000381990 ZNF444Q8N0Y2 327 aaPredicted RBP10.08□□□□□ -0.8
GPNMB-202ENST00000381990 CERS5Q8N5B7 392 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 PDE11AQ9HCR9 933 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 VPS18Q9P253 973 aa10.08□□□□□ -0.8
GPNMB-202ENST00000381990 TSPY3P0CV98 308 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 TSPY8P0CW00 308 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 RASA1P20936 1047 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 KIF5BP33176 963 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 C16orf86Q6ZW13 317 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 PODNQ7Z5L7 613 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 CNGA4Q8IV77 575 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 SPATA20Q8TB22 786 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 CNKSR1Q969H4 720 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 CLIC6Q96NY7 704 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 KAT14Q9H8E8 782 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 MRPL44Q9H9J2 332 aaKnown RBP10.07□□□□□ -0.8
GPNMB-202ENST00000381990 IL17RBQ9NRM6 502 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 KCNJ14Q9UNX9 436 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 SLX4Q8IY92 1834 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 BTBD18B2RXH4 712 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 MCM6Q14566 821 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 PKN1Q16512 942 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 RILPL1Q5EBL4 403 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 C10orf67Q8IYJ2 551 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 DESI2Q9BSY9 194 aa10.07□□□□□ -0.8
GPNMB-202ENST00000381990 V9GY48 417 aaPredicted RBP10.07□□□□□ -0.8
GPNMB-202ENST00000381990 CNTNAP5Q8WYK1 1306 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 FECHP22830 423 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 PTPREP23469 700 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 MCM3P25205 808 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 CDK8P49336 464 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 FMR1Q06787 632 aaKnown RBP eCLIP10.06□□□□□ -0.8
GPNMB-202ENST00000381990 KARSQ15046 597 aaKnown RBP10.06□□□□□ -0.8
GPNMB-202ENST00000381990 SLC44A5Q8NCS7 719 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 VIPAS39Q9H9C1 493 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 CEP131Q9UPN4 1083 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 ITIH6Q6UXX5 1313 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 WDR93Q6P2C0 686 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 HHIPL2Q6UWX4 724 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 SRBD1Q8N5C6 995 aaKnown RBP10.06□□□□□ -0.8
GPNMB-202ENST00000381990 PNMA1Q8ND90 353 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 LZTFL1Q9NQ48 299 aa10.06□□□□□ -0.8
GPNMB-202ENST00000381990 CTAGE15A4D2H0 777 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 SOWAHDA6NJG2 315 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 F8W031 263 aaPredicted RBP10.05□□□□□ -0.8
GPNMB-202ENST00000381990 CTAGE8P0CG41 777 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 CHRNA5P30532 468 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 MAGEA9P43362 315 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 KIF4BQ2VIQ3 1234 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 FILIP1LQ4L180 1135 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 SPATA1Q5VX52 437 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 CTAGE6Q86UF2 777 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 CTAGE4Q8IX94 777 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 IGSF22Q8N9C0 903 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 SNED1Q8TER0 1413 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 USP17L3A6NCW0 530 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 USP17L4A6NCW7 530 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 POLR2DO15514 142 aaKnown RBP10.05□□□□□ -0.8
GPNMB-202ENST00000381990 MFAP3LO75121 409 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 PBX1P40424 430 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 GYS2P54840 703 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 FKBP1AP62942 108 aaKnown RBP10.05□□□□□ -0.8
GPNMB-202ENST00000381990 CASP8Q14790 479 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 CC2D2BQ6DHV5 1058 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 USP17L1Q7RTZ2 530 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 NEDD1Q8NHV4 660 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 TEKT1Q969V4 418 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 PNKPQ96T60 521 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 NAPGQ99747 312 aaPredicted RBP10.05□□□□□ -0.8
GPNMB-202ENST00000381990 PHF20Q9BVI0 1012 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 VPS54Q9P1Q0 977 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 LCMT1Q9UIC8 334 aa10.05□□□□□ -0.8
GPNMB-202ENST00000381990 FBXO2Q9UK22 296 aaPredicted RBP10.05□□□□□ -0.8
GPNMB-202ENST00000381990 TRIM66O15016 1216 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 NOP2P46087 812 aaKnown RBP10.04□□□□□ -0.8
GPNMB-202ENST00000381990 BAG6P46379 1132 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 GNAQP50148 359 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 NR5A1Q13285 461 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 GRM4Q14833 912 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 ZNF569Q5MCW4 686 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 STRIP1Q5VSL9 837 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 RAD9BQ6WBX8 426 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms