RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 ADAMTSL3P82987 1691 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 SRGAP2O75044 1071 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 TDP2O95551 362 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 PLS1Q14651 629 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 CCDC122Q5T0U0 273 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 SLC30A10Q6XR72 485 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 POTEDQ86YR6 584 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 MED15Q96RN5 788 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 CHMP2AO43633 222 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 CCDC40Q4G0X9 1142 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 RABEP2Q9H5N1 569 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 BMP2KQ9NSY1 1161 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 THRAP3Q9Y2W1 955 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 PSDA5PKW4 1024 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 USP17L15C9J2P7 530 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 USP17L13C9JLJ4 530 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 USP17L11C9JVI0 530 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 USP17L18D6R9N7 530 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 USP17L22D6RA61 530 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 USP17L17D6RBQ6 530 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 USP17L19D6RCP7 530 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 USP17L20D6RJB6 530 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 CYTH3O43739 400 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 AKR1B1P15121 316 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 USP17L24Q0WX57 530 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 IL17AQ16552 155 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 TBC1D10BQ4KMP7 808 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 RCSD1Q6JBY9 416 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 USP17L6PQ6QN14 398 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 GSDMAQ96QA5 445 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 CTAGE1Q96RT6 745 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 BPIFA3Q9BQP9 254 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 OGFRQ9NZT2 677 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 PCDHAC2Q9Y5I4 1007 aa12.28□□□□□ -0.44
DNMT3A-203ENST00000380746 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.44
DNMT3A-203ENST00000380746 AKR1B10O60218 316 aa12.27□□□□□ -0.44
DNMT3A-203ENST00000380746 PMS1P54277 932 aaKnown RBP12.27□□□□□ -0.44
DNMT3A-203ENST00000380746 SYCP1Q15431 976 aa12.27□□□□□ -0.44
DNMT3A-203ENST00000380746 CALCRLQ16602 461 aa12.27□□□□□ -0.44
DNMT3A-203ENST00000380746 NCAPH2Q6IBW4 605 aa12.27□□□□□ -0.44
DNMT3A-203ENST00000380746 TMED8Q6PL24 325 aaPredicted RBP12.27□□□□□ -0.44
DNMT3A-203ENST00000380746 MAEAQ7L5Y9 396 aa12.27□□□□□ -0.44
DNMT3A-203ENST00000380746 KCNQ5Q9NR82 932 aa12.27□□□□□ -0.44
DNMT3A-203ENST00000380746 HDAC6Q9UBN7 1215 aa12.27□□□□□ -0.44
DNMT3A-203ENST00000380746 CTAGE9A4FU28 777 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 MEIS1O00470 390 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 GNA11P29992 359 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 ATP2C1P98194 919 aaPredicted RBP12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 MDM2Q00987 491 aaPredicted RBP12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 CYP4A11Q02928 519 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 TMEM266Q2M3C6 531 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 SHROOM1Q2M3G4 852 aaPredicted RBP12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 RMND1Q9NWS8 449 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 PCDHA6Q9UN73 950 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 PCDHA8Q9Y5H6 950 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 ALS2Q96Q42 1657 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 OR52Z1P0C646 297 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 RASA1P20936 1047 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 DISC1Q9NRI5 854 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 LRRC4BQ9NT99 713 aa12.27□□□□□ -0.45
DNMT3A-203ENST00000380746 CTIFO43310 598 aaKnown RBP12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 STX10O60499 249 aa12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 CHMP4BP1P59074 171 aa12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 BMS1Q14692 1282 aaKnown RBP12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 PPP2R5BQ15173 497 aa12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 RBM26Q5T8P6 1007 aaKnown RBP12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 CNGA4Q8IV77 575 aa12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 REXO1L1PQ8IX06 675 aa12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 TMEM51Q9NW97 253 aa12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 POLLQ9UGP5 575 aa12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 TRAF5O00463 557 aa12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 KRT79Q5XKE5 535 aa12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 FNBP4Q8N3X1 1017 aaPredicted RBP12.26□□□□□ -0.45
DNMT3A-203ENST00000380746 RNF225M0QZC1 329 aaPredicted RBP12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 ERCC5P28715 1186 aaPredicted RBP12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 CXCR5P32302 372 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 SMCR8Q8TEV9 937 aaPredicted RBP12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 ANKRD7Q92527 254 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 QTRT2Q9H974 415 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 VEZTQ9HBM0 779 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 ARFGAP3Q9NP61 516 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 SLC1A4P43007 532 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 FUT2Q10981 343 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 STK4Q13043 487 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 SV2BQ7L1I2 683 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 KRT26Q7Z3Y9 468 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 SUGCTQ9HAC7 445 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 MAD2L2Q9UI95 211 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 PHRF1Q9P1Y6 1649 aaKnown RBP12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 TTC26A0AVF1 554 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 HLA-DOAP06340 250 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 SPA17Q15506 151 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 C2CD5Q86YS7 1000 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 CCDC155Q8N6L0 562 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 TUBGCP2Q9BSJ2 902 aa12.25□□□□□ -0.45
DNMT3A-203ENST00000380746 SEPT11Q9NVA2 429 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms