RNA–Protein interactions for RNA: ENST00000378748.7

OPTN-203, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-203ENST00000378748 CCDC66A2RUB6 948 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 PSDA5PKW4 1024 aaPredicted RBP9.49□□□□□ -0.89
OPTN-203ENST00000378748 SMIM23A6NLE4 172 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 ERVV-1B6SEH8 477 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 USP17L11C9JVI0 530 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 USP17L18D6R9N7 530 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 USP17L22D6RA61 530 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 USP17L17D6RBQ6 530 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 USP17L19D6RCP7 530 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 USP17L20D6RJB6 530 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
OPTN-203ENST00000378748 N4BP1O75113 896 aaKnown RBP9.49□□□□□ -0.89
OPTN-203ENST00000378748 TRIM37O94972 964 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 CALML3P27482 149 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 USP17L24Q0WX57 530 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 HERC4Q5GLZ8 1057 aaPredicted RBP9.49□□□□□ -0.89
OPTN-203ENST00000378748 USP17L6PQ6QN14 398 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 ENOX1Q8TC92 643 aaKnown RBP9.49□□□□□ -0.89
OPTN-203ENST00000378748 ANKRD7Q92527 254 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 NAPGQ99747 312 aaPredicted RBP9.49□□□□□ -0.89
OPTN-203ENST00000378748 FAM208AQ9UK61 1670 aaKnown RBP9.49□□□□□ -0.89
OPTN-203ENST00000378748 ZNF142P52746 1687 aaPredicted RBP9.49□□□□□ -0.89
OPTN-203ENST00000378748 TDP2O95551 362 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 LDHCP07864 332 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 PMS1P54277 932 aaKnown RBP9.49□□□□□ -0.89
OPTN-203ENST00000378748 APBA1Q02410 837 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 TROAPQ12815 778 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 NONOQ15233 471 aaKnown RBP eCLIP9.49□□□□□ -0.89
OPTN-203ENST00000378748 TMEM266Q2M3C6 531 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.49□□□□□ -0.89
OPTN-203ENST00000378748 SMARCC1Q92922 1105 aaPredicted RBP9.49□□□□□ -0.89
OPTN-203ENST00000378748 JAKMIP2Q96AA8 810 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 CEP95Q96GE4 821 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 CTAGE1Q96RT6 745 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 TUBGCP2Q9BSJ2 902 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 VEZTQ9HBM0 779 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 TCEAL9Q9UHQ7 104 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 USP21Q9UK80 565 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 FBXO3Q9UK99 471 aa9.49□□□□□ -0.89
OPTN-203ENST00000378748 EPN1Q9Y6I3 576 aaPredicted RBP9.49□□□□□ -0.89
OPTN-203ENST00000378748 RNF225M0QZC1 329 aaPredicted RBP9.48□□□□□ -0.89
OPTN-203ENST00000378748 ZEB2O60315 1214 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 PLEKP08567 350 aaPredicted RBP9.48□□□□□ -0.89
OPTN-203ENST00000378748 C2orf54Q08AI8 447 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 KIF5AQ12840 1032 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 MKRN4PQ13434 485 aaPredicted RBP9.48□□□□□ -0.89
OPTN-203ENST00000378748 PKN1Q16512 942 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 POTEDQ86YR6 584 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 REXO1L1PQ8IX06 675 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 REXO1Q8N1G1 1221 aaKnown RBP9.48□□□□□ -0.89
OPTN-203ENST00000378748 TUBE1Q9UJT0 475 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 PACSIN2Q9UNF0 486 aaPredicted RBP9.48□□□□□ -0.89
OPTN-203ENST00000378748 RGPD5Q99666 1765 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 NCK2O43639 380 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 STX10O60499 249 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 FGFR2P21802 821 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 CALCRLQ16602 461 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 LONRF2Q1L5Z9 754 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 KRT79Q5XKE5 535 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 FERMT2Q96AC1 680 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 CNOT6LQ96LI5 555 aaKnown RBP9.48□□□□□ -0.89
OPTN-203ENST00000378748 ABCB6Q9NP58 842 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 HOMER2Q9NSB8 354 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 USP40Q9NVE5 1235 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 GGA1Q9UJY5 639 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 SAMM50Q9Y512 469 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 PHRF1Q9P1Y6 1649 aaKnown RBP9.48□□□□□ -0.89
OPTN-203ENST00000378748 ABCC12Q96J65 1359 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 CDHR2Q9BYE9 1310 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 TMEM110-MUSTN1A8MSY1 372 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 CTIFO43310 598 aaKnown RBP9.48□□□□□ -0.89
OPTN-203ENST00000378748 PRPF3O43395 683 aaKnown RBP9.48□□□□□ -0.89
OPTN-203ENST00000378748 HOXA13P31271 388 aaPredicted RBP9.48□□□□□ -0.89
OPTN-203ENST00000378748 NAA35Q5VZE5 725 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 KCTD16Q68DU8 428 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 KLHL7Q8IXQ5 586 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 TIGD1Q96MW7 591 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 SPAG5Q96R06 1193 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 GOLPH3Q9H4A6 298 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 BSDC1Q9NW68 430 aaPredicted RBP9.48□□□□□ -0.89
OPTN-203ENST00000378748 HPSEQ9Y251 543 aa9.48□□□□□ -0.89
OPTN-203ENST00000378748 NPHP3-ACAD11A0A0J9YXS1 232 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 HGSO14964 777 aaPredicted RBP9.47□□□□□ -0.89
OPTN-203ENST00000378748 STAT3P40763 770 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 GUCY2FP51841 1108 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 STK4Q13043 487 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 UTP14CQ5TAP6 766 aaKnown RBP9.47□□□□□ -0.89
OPTN-203ENST00000378748 CYP26C1Q6V0L0 522 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 SV2BQ7L1I2 683 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 NOA1Q8NC60 698 aaKnown RBP9.47□□□□□ -0.89
OPTN-203ENST00000378748 MLXIPQ9HAP2 919 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 FAN1Q9Y2M0 1017 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 ADGRG1Q9Y653 693 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 PARP3Q9Y6F1 533 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 CDK8P49336 464 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 RASSF7Q02833 373 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 RIC1Q4ADV7 1423 aa9.47□□□□□ -0.89
OPTN-203ENST00000378748 CCDC84Q86UT8 332 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms