RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 TMX1Q9H3N1 280 aa21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 GNA11P29992 359 aa21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 CCT6AP40227 531 aaKnown RBP21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 SHROOM1Q2M3G4 852 aaPredicted RBP21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 TTBK2Q6IQ55 1244 aa21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 APTXQ7Z2E3 356 aaKnown RBP21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 KCND1Q9NSA2 647 aa21.74■■□□□ 1.07
PCDHA4-201ENST00000378125 A0A1B0GTH6 734 aa21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 CTIFO43310 598 aaKnown RBP21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 SHMT1P34896 483 aa21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 SLC16A2P36021 539 aa21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 TECP42680 631 aa21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 KRT25Q7Z3Z0 450 aa21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 TMEM139Q8IV31 216 aa21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 TC2NQ8N9U0 490 aa21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 V9GYY5 206 aaPredicted RBP21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 PSDA5PKW4 1024 aaPredicted RBP21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 KIF18AQ8NI77 898 aa21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 BAG1Q99933 345 aaPredicted RBP21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 PYM1Q9BRP8 204 aaKnown RBP21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 RIOX1Q9H6W3 641 aa21.73■■□□□ 1.07
PCDHA4-201ENST00000378125 FOCADQ5VW36 1801 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 COL11A2P13942 1736 aaPredicted RBP21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 CRKP46108 304 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 NOVP48745 357 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 DHX8Q14562 1220 aaKnown RBP21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 CDKAL1Q5VV42 579 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 KCTD1Q719H9 257 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 NEK8Q86SG6 692 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 C2CD5Q86YS7 1000 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 FAM177A1Q8N128 213 aaPredicted RBP21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 REXO1Q8N1G1 1221 aaKnown RBP21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 NELFBQ8WX92 580 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 SUGT1Q9Y2Z0 365 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 TTLL1O95922 423 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 OR52Z1P0C646 297 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 PRCPP42785 496 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 POTEDQ86YR6 584 aa21.72■■□□□ 1.07
PCDHA4-201ENST00000378125 PLSCR1O15162 318 aa21.71■■□□□ 1.07
PCDHA4-201ENST00000378125 CHRNA5P30532 468 aa21.71■■□□□ 1.07
PCDHA4-201ENST00000378125 ZNF658Q5TYW1 1059 aaPredicted RBP21.71■■□□□ 1.07
PCDHA4-201ENST00000378125 TRIM49BA6NDI0 452 aa21.71■■□□□ 1.07
PCDHA4-201ENST00000378125 PAK1Q13153 545 aa21.71■■□□□ 1.07
PCDHA4-201ENST00000378125 CCDC96Q2M329 555 aa21.71■■□□□ 1.07
PCDHA4-201ENST00000378125 CABP7Q86V35 215 aa21.71■■□□□ 1.07
PCDHA4-201ENST00000378125 VPS16Q9H269 839 aa21.71■■□□□ 1.07
PCDHA4-201ENST00000378125 ADD3Q9UEY8 706 aaKnown RBP21.71■■□□□ 1.07
PCDHA4-201ENST00000378125 IGKV6D-41A0A0C4DH26 115 aa21.7■■□□□ 1.06
PCDHA4-201ENST00000378125 PLCG1P19174 1290 aa21.7■■□□□ 1.06
PCDHA4-201ENST00000378125 TXKP42681 527 aa21.7■■□□□ 1.06
PCDHA4-201ENST00000378125 NCBP1Q09161 790 aaKnown RBP21.7■■□□□ 1.06
PCDHA4-201ENST00000378125 ADGRF4Q8IZF3 695 aa21.7■■□□□ 1.06
PCDHA4-201ENST00000378125 HLA-DOAP06340 250 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 RBL2Q08999 1139 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 UBE2SQ16763 222 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 KMT5BQ4FZB7 885 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 TOGARAM2Q6ZUX3 1019 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 IGSF22Q8N9C0 903 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 ZNF215Q9UL58 517 aaPredicted RBP21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 MYH8P13535 1937 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 ASPRV1Q53RT3 343 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 CT47A1Q5JQC4 288 aaPredicted RBP21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 HHIPL2Q6UWX4 724 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 ZSCAN29Q8IWY8 852 aaPredicted RBP21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 DESI2Q9BSY9 194 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 JMJD4Q9H9V9 463 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 RMND1Q9NWS8 449 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 PLIN4Q96Q06 1357 aa21.69■■□□□ 1.06
PCDHA4-201ENST00000378125 PPP1R11O60927 126 aaPredicted RBP21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 KCNJ6P48051 423 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 MTF1Q14872 753 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 KRT31Q15323 416 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 UIMC1Q96RL1 719 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 TAB2Q9NYJ8 693 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 DNAI1Q9UI46 699 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 RWDD2AQ9UIY3 292 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 DDTLA6NHG4 134 aaPredicted RBP21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 LAD1O00515 517 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 ARHGAP6O43182 974 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 TDP2O95551 362 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 ADCY7P51828 1080 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 ZNF543Q08ER8 600 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 REXO1L1PQ8IX06 675 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 EEF2KMTQ96G04 330 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 CCSER1Q9C0I3 900 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 DNAJC18Q9H819 358 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 SWAP70Q9UH65 585 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 PPP2R2CQ9Y2T4 447 aa21.68■■□□□ 1.06
PCDHA4-201ENST00000378125 USP17L10C9JJH3 530 aa21.67■■□□□ 1.06
PCDHA4-201ENST00000378125 ECE2O60344 883 aa21.67■■□□□ 1.06
PCDHA4-201ENST00000378125 SNHG28P0DPA3 235 aa21.67■■□□□ 1.06
PCDHA4-201ENST00000378125 SMARCA1P28370 1054 aa21.67■■□□□ 1.06
PCDHA4-201ENST00000378125 PRPHP41219 470 aa21.67■■□□□ 1.06
PCDHA4-201ENST00000378125 PMS1P54277 932 aaKnown RBP21.67■■□□□ 1.06
PCDHA4-201ENST00000378125 FILIP1LQ4L180 1135 aa21.67■■□□□ 1.06
PCDHA4-201ENST00000378125 AKR1B15C9JRZ8 316 aaPredicted RBP21.67■■□□□ 1.06
PCDHA4-201ENST00000378125 N4BP3O15049 544 aa21.67■■□□□ 1.06
PCDHA4-201ENST00000378125 SLC37A4O43826 429 aa21.67■■□□□ 1.06
PCDHA4-201ENST00000378125 TNNI2P48788 182 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms