RNA–Protein interactions for RNA: ENST00000377792.3

POLR1E-201, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2 BASIC

Gene POLR1E, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-201ENST00000377792 GGA1Q9UJY5 639 aa12.37□□□□□ -0.43
POLR1E-201ENST00000377792 MRFAP1Q9Y605 127 aa12.37□□□□□ -0.43
POLR1E-201ENST00000377792 THSD7AQ9UPZ6 1657 aa12.37□□□□□ -0.43
POLR1E-201ENST00000377792 H7C1D1 291 aa12.36□□□□□ -0.43
POLR1E-201ENST00000377792 TPM1P09493 284 aa12.36□□□□□ -0.43
POLR1E-201ENST00000377792 CLCN6P51797 869 aa12.36□□□□□ -0.43
POLR1E-201ENST00000377792 KCNB1Q14721 858 aa12.36□□□□□ -0.43
POLR1E-201ENST00000377792 UTP14CQ5TAP6 766 aaKnown RBP12.36□□□□□ -0.43
POLR1E-201ENST00000377792 ANKRD20A12PQ8NF67 263 aa12.36□□□□□ -0.43
POLR1E-201ENST00000377792 RASSF8Q8NHQ8 419 aa12.36□□□□□ -0.43
POLR1E-201ENST00000377792 GTPBP4Q9BZE4 634 aaKnown RBP12.36□□□□□ -0.43
POLR1E-201ENST00000377792 LRRC4BQ9NT99 713 aa12.36□□□□□ -0.43
POLR1E-201ENST00000377792 KBTBD4Q9NVX7 518 aa12.36□□□□□ -0.43
POLR1E-201ENST00000377792 FLT1P17948 1338 aa12.36□□□□□ -0.43
POLR1E-201ENST00000377792 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.35□□□□□ -0.43
POLR1E-201ENST00000377792 A0A0U1RQJ8 604 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 KLRC4O43908 158 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 MYL1P05976 194 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 PARP1P09874 1014 aaKnown RBP12.35□□□□□ -0.43
POLR1E-201ENST00000377792 PLCG2P16885 1265 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 ADRA2BP18089 450 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 NAPAP54920 295 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 RHBDL3P58872 404 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 KRT25Q7Z3Z0 450 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 IRF2BP1Q8IU81 584 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 KRT222Q8N1A0 295 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 LRRC15Q8TF66 581 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 ATRIPQ8WXE1 791 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 FAM163AQ96GL9 167 aaPredicted RBP12.35□□□□□ -0.43
POLR1E-201ENST00000377792 PLIN2Q99541 437 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 IRX2Q9BZI1 471 aaPredicted RBP12.35□□□□□ -0.43
POLR1E-201ENST00000377792 LZTFL1Q9NQ48 299 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 NAV1Q8NEY1 1877 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 RNF225M0QZC1 329 aaPredicted RBP12.35□□□□□ -0.43
POLR1E-201ENST00000377792 PPP2R3AQ06190 1150 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 USP17L2Q6R6M4 530 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 CCDC12Q8WUD4 166 aaPredicted RBP12.35□□□□□ -0.43
POLR1E-201ENST00000377792 RBM17Q96I25 401 aaKnown RBP12.35□□□□□ -0.43
POLR1E-201ENST00000377792 ABHD10Q9NUJ1 306 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 PRDM4Q9UKN5 801 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 TAF1LQ8IZX4 1826 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 LY75O60449 1722 aa12.35□□□□□ -0.43
POLR1E-201ENST00000377792 TRIM49BA6NDI0 452 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 SMCO2A6NFE2 343 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 RHOBTB3O94955 611 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 PMS1P54277 932 aaKnown RBP12.34□□□□□ -0.43
POLR1E-201ENST00000377792 SEMA3FQ13275 785 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 TRIM14Q14142 442 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 NONOQ15233 471 aaKnown RBP eCLIP12.34□□□□□ -0.43
POLR1E-201ENST00000377792 MFSD14BQ5SR56 506 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 TMTC1Q8IUR5 882 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 CREBRFQ8IUR6 639 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 RRP36Q96EU6 259 aaKnown RBP12.34□□□□□ -0.43
POLR1E-201ENST00000377792 CEP95Q96GE4 821 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 AK8Q96MA6 479 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 C6orf50Q9HD87 102 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 GAKO14976 1311 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 SERPINB2P05120 415 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 OR52Z1P0C646 297 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 GYS1P13807 737 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 SMARCA1P28370 1054 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 GNA11P29992 359 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 NOVP48745 357 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 ERVK-24P63145 666 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 ST5P78524 1137 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 BMS1Q14692 1282 aaKnown RBP12.34□□□□□ -0.43
POLR1E-201ENST00000377792 LETM2Q2VYF4 491 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 CABP7Q86V35 215 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 GIMAP8Q8ND71 665 aaPredicted RBP12.34□□□□□ -0.43
POLR1E-201ENST00000377792 NUP88Q99567 741 aaPredicted RBP12.34□□□□□ -0.43
POLR1E-201ENST00000377792 CUEDC2Q9H467 287 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 POLLQ9UGP5 575 aa12.34□□□□□ -0.43
POLR1E-201ENST00000377792 KIF5CO60282 957 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 CCNT1O60563 726 aaKnown RBP12.33□□□□□ -0.44
POLR1E-201ENST00000377792 BBOX1O75936 387 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 PLCG1P19174 1290 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 UBXN1Q04323 297 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 TXNRD1Q16881 649 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 RSRC2Q7L4I2 434 aaKnown RBP12.33□□□□□ -0.44
POLR1E-201ENST00000377792 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 TBC1D16Q8TBP0 767 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 MAGEF1Q9HAY2 307 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 ARGLU1Q9NWB6 273 aaPredicted RBP12.33□□□□□ -0.44
POLR1E-201ENST00000377792 SEC63Q9UGP8 760 aaKnown RBP12.33□□□□□ -0.44
POLR1E-201ENST00000377792 TTF2Q9UNY4 1162 aaKnown RBP12.33□□□□□ -0.44
POLR1E-201ENST00000377792 FHOD1Q9Y613 1164 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 KRT9P35527 623 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 GABPB1Q06547 395 aaPredicted RBP12.33□□□□□ -0.44
POLR1E-201ENST00000377792 STIM1Q13586 685 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 SOGA3Q5TF21 947 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 CYP26C1Q6V0L0 522 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 NEK8Q86SG6 692 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 ACRBPQ8NEB7 543 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 TBC1D22AQ8WUA7 517 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 PIGSQ96S52 555 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 THAP9Q9H5L6 903 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 VAT1LQ9HCJ6 419 aa12.33□□□□□ -0.44
POLR1E-201ENST00000377792 DDX60LQ5H9U9 1706 aaKnown RBP12.33□□□□□ -0.44
POLR1E-201ENST00000377792 USP17L5A8MUK1 530 aa12.32□□□□□ -0.44
POLR1E-201ENST00000377792 LGALS16A8MUM7 142 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms