RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 MTRQ99707 1265 aa12.92□□□□□ -0.34
SEC23B-204ENST00000377475 CCDC87Q9NVE4 849 aa12.92□□□□□ -0.34
SEC23B-204ENST00000377475 SRP68Q9UHB9 627 aaKnown RBP12.92□□□□□ -0.34
SEC23B-204ENST00000377475 TOPAZ1Q8N9V7 1692 aa12.92□□□□□ -0.34
SEC23B-204ENST00000377475 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
SEC23B-204ENST00000377475 PLCG1P19174 1290 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 CCDC40Q4G0X9 1142 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 TCERG1LQ5VWI1 586 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 TMTC3Q6ZXV5 915 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 HDAC7Q8WUI4 952 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 PHF20Q9BVI0 1012 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 NOP2P46087 812 aaKnown RBP12.91□□□□□ -0.34
SEC23B-204ENST00000377475 APBA1Q02410 837 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 RASSF7Q02833 373 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 TROAPQ12815 778 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 DDB1Q16531 1140 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 IL17AQ16552 155 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 NFRKBQ6P4R8 1299 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 CABP7Q86V35 215 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 KLHL7Q8IXQ5 586 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
SEC23B-204ENST00000377475 NHEJ1Q9H9Q4 299 aaPredicted RBP12.91□□□□□ -0.34
SEC23B-204ENST00000377475 RMND1Q9NWS8 449 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 LRRC37A3O60309 1634 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 RIC1Q4ADV7 1423 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 HIBADHP31937 336 aaKnown RBP12.91□□□□□ -0.34
SEC23B-204ENST00000377475 STK4Q13043 487 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 RNF187Q5TA31 235 aaPredicted RBP12.91□□□□□ -0.34
SEC23B-204ENST00000377475 TXNRD3Q86VQ6 643 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 MB21D1Q8N884 522 aa12.91□□□□□ -0.34
SEC23B-204ENST00000377475 IFIH1Q9BYX4 1025 aaKnown RBP12.91□□□□□ -0.34
SEC23B-204ENST00000377475 SEPT11Q9NVA2 429 aaKnown RBP12.91□□□□□ -0.34
SEC23B-204ENST00000377475 ABCC12Q96J65 1359 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 PRPF3O43395 683 aaKnown RBP12.9□□□□□ -0.34
SEC23B-204ENST00000377475 LLGL1Q15334 1064 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 MAATS1Q7Z4T9 603 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 SECISBP2LQ93073 1101 aaKnown RBP12.9□□□□□ -0.34
SEC23B-204ENST00000377475 COA7Q96BR5 231 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 MS4A14Q96JA4 679 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 GOLPH3Q9H4A6 298 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 TMEM260Q9NX78 707 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 GOLGA6CA6NDK9 693 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 GOLGA6BA6NDN3 693 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 RCCD1A6NED2 376 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 GOLGA6DP0CG33 693 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 TRIM28Q13263 835 aaKnown RBP12.9□□□□□ -0.34
SEC23B-204ENST00000377475 ZNF658Q5TYW1 1059 aaPredicted RBP12.9□□□□□ -0.34
SEC23B-204ENST00000377475 IPO4Q8TEX9 1081 aaKnown RBP12.9□□□□□ -0.34
SEC23B-204ENST00000377475 GOLGA6AQ9NYA3 693 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 SEC63Q9UGP8 760 aaKnown RBP12.9□□□□□ -0.34
SEC23B-204ENST00000377475 ARHGAP23Q9P227 1491 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 TUBGCP6Q96RT7 1819 aa12.9□□□□□ -0.34
SEC23B-204ENST00000377475 LOC102724428A0A0B4J2F2 783 aa12.9□□□□□ -0.35
SEC23B-204ENST00000377475 TMCO5BA8MYB1 307 aa12.9□□□□□ -0.35
SEC23B-204ENST00000377475 BACH1O14867 736 aa12.9□□□□□ -0.35
SEC23B-204ENST00000377475 FTCDO95954 541 aa12.9□□□□□ -0.35
SEC23B-204ENST00000377475 MYBL2P10244 700 aa12.9□□□□□ -0.35
SEC23B-204ENST00000377475 KCNJ6P48051 423 aa12.9□□□□□ -0.35
SEC23B-204ENST00000377475 SIK1P57059 783 aa12.9□□□□□ -0.35
SEC23B-204ENST00000377475 TXNRD1Q16881 649 aa12.9□□□□□ -0.35
SEC23B-204ENST00000377475 ADAT2Q7Z6V5 191 aaKnown RBP12.9□□□□□ -0.35
SEC23B-204ENST00000377475 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.35
SEC23B-204ENST00000377475 SH2D3CQ8N5H7 860 aa12.9□□□□□ -0.35
SEC23B-204ENST00000377475 RRP36Q96EU6 259 aaKnown RBP12.9□□□□□ -0.35
SEC23B-204ENST00000377475 NAA15Q9BXJ9 866 aaKnown RBP12.9□□□□□ -0.35
SEC23B-204ENST00000377475 TRIM31Q9BZY9 425 aa12.9□□□□□ -0.35
SEC23B-204ENST00000377475 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.35
SEC23B-204ENST00000377475 SMCO2A6NFE2 343 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 POTEB2H3BUK9 544 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 USO1O60763 962 aaKnown RBP12.89□□□□□ -0.35
SEC23B-204ENST00000377475 MAP9Q49MG5 647 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 GOLGA5Q8TBA6 731 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 ZNF335Q9H4Z2 1342 aaPredicted RBP12.89□□□□□ -0.35
SEC23B-204ENST00000377475 POTEMA6NI47 508 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 KLRF2D3W0D1 207 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 TRAF5O00463 557 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 SLURP2P0DP57 97 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 MAGEA1P43355 309 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 KRT83P78385 493 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 PRPF4BQ13523 1007 aaKnown RBP12.89□□□□□ -0.35
SEC23B-204ENST00000377475 ODF2Q5BJF6 829 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 ANKRD40Q6AI12 368 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 DCP1AQ9NPI6 582 aaPredicted RBP12.89□□□□□ -0.35
SEC23B-204ENST00000377475 DISC1Q9NRI5 854 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
SEC23B-204ENST00000377475 RWDD2AQ9UIY3 292 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 L1RE1Q9UN81 338 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 STK36Q9NRP7 1315 aa12.89□□□□□ -0.35
SEC23B-204ENST00000377475 SMIM23A6NLE4 172 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 PAFAH1B1P43034 410 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 RAPGEF1Q13905 1077 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 SEC23AQ15436 765 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 WHAMMP3Q1A5X7 153 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 COG1Q8WTW3 980 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 FAM84BQ96KN1 310 aaPredicted RBP12.88□□□□□ -0.35
SEC23B-204ENST00000377475 KDM4FA0A1W2PPD8 638 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 ATP2C1P98194 919 aaPredicted RBP12.88□□□□□ -0.35
SEC23B-204ENST00000377475 KSR1Q8IVT5 923 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms