RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CDHR2Q9BYE9 1310 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 CRCPO75575 148 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 RFC1P35251 1148 aaPredicted RBP13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 RASA3Q14644 834 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 FAM47AQ5JRC9 791 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 OTUD7BQ6GQQ9 843 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 SPATS2Q86XZ4 545 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 NELFBQ8WX92 580 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 RAB17Q9H0T7 212 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 DDX41Q9UJV9 622 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 CCNT1O60563 726 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 ADD2P35612 726 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 TCP10Q12799 353 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 PEX26Q7Z412 305 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 IFIH1Q9BYX4 1025 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 PARP2Q9UGN5 583 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 KRT15P19012 456 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 LGSNQ5TDP6 509 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 ANKRD20A3Q5VUR7 823 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 AFAP1L2Q8N4X5 818 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 EPSTI1Q96J88 318 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 BSDC1Q9NW68 430 aaPredicted RBP13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 NARFQ9UHQ1 456 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 CAPN7Q9Y6W3 813 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 BTDP43251 543 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 GNGT1P63211 74 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 CCDC105Q8IYK2 499 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 SRP68Q9UHB9 627 aaKnown RBP13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 TPCN1Q9ULQ1 816 aa13.55□□□□□ -0.24
NPLOC4-202ENST00000374747 EFCAB8A8MWE9 144 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 GOLGA8KD6RF30 607 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 SMTNP53814 917 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 SFMBT2Q5VUG0 894 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 PI4K2BQ8TCG2 481 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 BACH1O14867 736 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 NONOQ15233 471 aaKnown RBP eCLIP13.54□□□□□ -0.246e-7■■■■□ 20.2
NPLOC4-202ENST00000374747 GBP7Q8N8V2 638 aaPredicted RBP13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 PPANQ9NQ55 473 aaKnown RBP13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 TACC3Q9Y6A5 838 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 ADCY7P51828 1080 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 ZMYM6O95789 1325 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 TXNDC9O14530 226 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 ADRA2BP18089 450 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 TXKP42681 527 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 TRIM58Q8NG06 486 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 TMOD4Q9NZQ9 345 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 USH1CQ9Y6N9 552 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 SALL3Q9BXA9 1300 aa13.54□□□□□ -0.24
NPLOC4-202ENST00000374747 TNKSO95271 1327 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 SETSIPP0DME0 302 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 TNFAIP1Q13829 316 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 PSMD6Q15008 389 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 DOK7Q18PE1 504 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 EPHA10Q5JZY3 1008 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 ISCA1Q9BUE6 129 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 GRAPQ13588 217 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 TRMT44Q8IYL2 757 aaKnown RBP13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 RASEFQ8IZ41 740 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 FANCBQ8NB91 859 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 GRAPLQ8TC17 118 aaPredicted RBP13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 MICAL1Q8TDZ2 1067 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 PFDN4Q9NQP4 134 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 COL15A1P39059 1388 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 VGLL3A8MV65 326 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 RGS16O15492 202 aaPredicted RBP13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 CTNNA1P35221 906 aaKnown RBP13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 MAIP1Q8WWC4 291 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 GDAP1L1Q96MZ0 367 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 ZNF215Q9UL58 517 aaPredicted RBP13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 EXOC7Q9UPT5 735 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 ADKP55263 362 aaKnown RBP13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 TSC1Q92574 1164 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 STK10O94804 968 aaKnown RBP13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 TRIM28Q13263 835 aaKnown RBP13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 GABPB2Q8TAK5 448 aaPredicted RBP13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 LRWD1Q9UFC0 647 aa13.53□□□□□ -0.24
NPLOC4-202ENST00000374747 SH3BP5O60239 455 aa13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 STX2P32856 288 aa13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 COL9A3Q14050 684 aaPredicted RBP13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 ZNF589Q86UQ0 364 aaPredicted RBP13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 RAB3IPQ96QF0 476 aaPredicted RBP13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 DDAH1O94760 285 aa13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 CYP21A2P08686 494 aa13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 PPARDQ03181 441 aa13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 MAP7Q14244 749 aa13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 SNX29Q8TEQ0 813 aa13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 GBP5Q96PP8 586 aa13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 MED4Q9NPJ6 270 aa13.52□□□□□ -0.24
NPLOC4-202ENST00000374747 TRPC3Q13507 836 aa13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 HERC4Q5GLZ8 1057 aaPredicted RBP13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 ADALQ6DHV7 355 aa13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 KIAA1468Q9P260 1216 aa13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 M0R2C6 588 aa13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 SH3BGRP55822 239 aaPredicted RBP13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 ETF1P62495 437 aaKnown RBP13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 KIAA0825Q8IV33 1275 aa13.52□□□□□ -0.25
NPLOC4-202ENST00000374747 GOLGA5Q8TBA6 731 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms