RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 CALCRLQ16602 461 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 ARL6IP4Q66PJ3 421 aaKnown RBP11.76□□□□□ -0.53
PGK1-201ENST00000373316 ENOX1Q8TC92 643 aaKnown RBP11.76□□□□□ -0.53
PGK1-201ENST00000373316 XPO4Q9C0E2 1151 aaKnown RBP11.76□□□□□ -0.53
PGK1-201ENST00000373316 STK17AQ9UEE5 414 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 MRVI1Q9Y6F6 885 aa11.76□□□□□ -0.53
PGK1-201ENST00000373316 FERP16591 822 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 ALDH1B1P30837 517 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 MAN1A1P33908 653 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 DNAJC21Q5F1R6 531 aaKnown RBP11.75□□□□□ -0.53
PGK1-201ENST00000373316 RAB11FIP4Q86YS3 637 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 REXO1Q8N1G1 1221 aaKnown RBP11.75□□□□□ -0.53
PGK1-201ENST00000373316 FAM71BQ8TC56 605 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 SCG2P13521 617 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 PAXIP1Q6ZW49 1069 aaPredicted RBP11.75□□□□□ -0.53
PGK1-201ENST00000373316 CCDC17Q96LX7 622 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 LCMT1Q9UIC8 334 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 SAR1BQ9Y6B6 198 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 LAMB4A4D0S4 1761 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 PHACTR2O75167 634 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 PDE8BO95263 885 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 MAGEA1P43355 309 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 KARSQ15046 597 aaKnown RBP11.75□□□□□ -0.53
PGK1-201ENST00000373316 SPATA24Q86W54 205 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 ZNF34Q8IZ26 560 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 MIGA1Q8NAN2 632 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 SCLT1Q96NL6 688 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 NKIRAS1Q9NYS0 192 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 TMOD4Q9NZQ9 345 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 PCDHA7Q9UN72 937 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 IFNAR1P17181 557 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 CDC37Q16543 378 aaPredicted RBP11.75□□□□□ -0.53
PGK1-201ENST00000373316 NSUN7Q8NE18 718 aaKnown RBP11.75□□□□□ -0.53
PGK1-201ENST00000373316 USP28Q96RU2 1077 aa11.75□□□□□ -0.53
PGK1-201ENST00000373316 KLRK1P26718 216 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 LETM2Q2VYF4 491 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 KRT26Q7Z3Y9 468 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 PANX2Q96RD6 677 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 AK9Q5TCS8 1911 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 CHST3Q7LGC8 479 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 CCDC170Q8IYT3 715 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 GRK7Q8WTQ7 553 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 MIS12Q9H081 205 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 PPP2R2CQ9Y2T4 447 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 KCNJ18B7U540 433 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 PHKA1P46020 1223 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 MORC3Q14149 939 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 KCNJ12Q14500 433 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 ALX1Q15699 326 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 SLC4A8Q2Y0W8 1093 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 ASPRV1Q53RT3 343 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 ATP6V0A2Q9Y487 856 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.74□□□□□ -0.53
PGK1-201ENST00000373316 GOLGA6CA6NDK9 693 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 CCNT1O60563 726 aaKnown RBP11.74□□□□□ -0.53
PGK1-201ENST00000373316 OR52Z1P0C646 297 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 GOLGA6DP0CG33 693 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 HSPA6P17066 643 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 STX17P56962 302 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 ARMC9Q7Z3E5 817 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 KRT27Q7Z3Y8 459 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 CCDC110Q8TBZ0 833 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 GOLGA6AQ9NYA3 693 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 RSPH14Q9UHP6 348 aa11.74□□□□□ -0.53
PGK1-201ENST00000373316 GOLGA6BA6NDN3 693 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 PRPF3O43395 683 aaKnown RBP11.73□□□□□ -0.53
PGK1-201ENST00000373316 LIG1P18858 919 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
PGK1-201ENST00000373316 CARD6Q9BX69 1037 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 TJP1Q07157 1748 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 JAK2O60674 1132 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 GAP43P17677 238 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 ADD2P35612 726 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 LACTBP83111 547 aaPredicted RBP11.73□□□□□ -0.53
PGK1-201ENST00000373316 CPLX4Q7Z7G2 160 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 SNX29Q8TEQ0 813 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 ZKSCAN3Q9BRR0 538 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 THAP9Q9H5L6 903 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 SERTAD1Q9UHV2 236 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 PCDHB13Q9Y5F0 798 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 NUP188Q5SRE5 1749 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 EIF3CLB5ME19 914 aaKnown RBP11.73□□□□□ -0.53
PGK1-201ENST00000373316 SCRN1Q12765 414 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 RESTQ13127 1097 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 RPS6KA1Q15418 735 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 ERCC6LQ2NKX8 1250 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 NEK8Q86SG6 692 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 CHURC1Q8WUH1 139 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 ATRIPQ8WXE1 791 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 TEKT1Q969V4 418 aa11.73□□□□□ -0.53
PGK1-201ENST00000373316 EIF3CQ99613 913 aaKnown RBP11.73□□□□□ -0.53
PGK1-201ENST00000373316 NTSR2O95665 410 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 BCAMP50895 628 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 GPATCH4Q5T3I0 446 aaKnown RBP11.72□□□□□ -0.53
PGK1-201ENST00000373316 MYOCDQ8IZQ8 938 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 ARHGAP24Q8N264 748 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 SMC6Q96SB8 1091 aa11.72□□□□□ -0.53
PGK1-201ENST00000373316 NR1I2O75469 434 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms