RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 BFSP1Q12934 665 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 NRBP2Q9NSY0 501 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 HIP1RO75146 1068 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 TMEM191BP0C7N4 346 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 DMP1Q13316 513 aaPredicted RBP12.64□□□□□ -0.39
VCL-202ENST00000372755 FAM47CQ5HY64 1035 aa12.64□□□□□ -0.39
VCL-202ENST00000372755 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.64□□□□□ -0.39
VCL-202ENST00000372755 DDAH1O94760 285 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 APBA1Q02410 837 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 FAM160B1Q5W0V3 765 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 SLC17A8Q8NDX2 589 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 CARD14Q9BXL6 1004 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 SSH2Q76I76 1423 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 EIF3CLB5ME19 914 aaKnown RBP12.63□□□□□ -0.39
VCL-202ENST00000372755 PPFIA2O75334 1257 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 KCNA6P17658 529 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 FAM178BQ8IXR5 827 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 EIF3CQ99613 913 aaKnown RBP12.63□□□□□ -0.39
VCL-202ENST00000372755 HAUS4Q9H6D7 363 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 SYCP2Q9BX26 1530 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 ALAS1P13196 640 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 CTSWP56202 376 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 RPS8P62241 208 aaKnown RBP12.63□□□□□ -0.39
VCL-202ENST00000372755 MFSD14BQ5SR56 506 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 MAP7D3Q8IWC1 876 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 RNF169Q8NCN4 708 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 MAGEF1Q9HAY2 307 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 DDX25Q9UHL0 483 aaKnown RBP12.63□□□□□ -0.39
VCL-202ENST00000372755 PASKQ96RG2 1323 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 ASXL2Q76L83 1435 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 RNF8O76064 485 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 TMOD1P28289 359 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 PAGR1Q9BTK6 254 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 LARSQ9P2J5 1176 aaKnown RBP12.63□□□□□ -0.39
VCL-202ENST00000372755 PNMA6EA0A0J9YXQ4 647 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 ARMCX5Q6P1M9 558 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 FBXO11Q86XK2 927 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 NME8Q8N427 588 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 LMBRD1Q9NUN5 540 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 RAPGEF6Q8TEU7 1601 aa12.63□□□□□ -0.39
VCL-202ENST00000372755 ABL1P00519 1130 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 H2AFZP0C0S5 128 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 BPIFB4P59827 614 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 GTF2IP78347 998 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 LMNB2Q03252 620 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 PDE1CQ14123 709 aaPredicted RBP12.62□□□□□ -0.39
VCL-202ENST00000372755 H2AFVQ71UI9 128 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 ATP2B4P23634 1241 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 COG7P83436 770 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 DNAJC10Q8IXB1 793 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 C17orf53Q8N3J3 647 aaPredicted RBP12.62□□□□□ -0.39
VCL-202ENST00000372755 A6NJR5 290 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 USP17L12C9JPN9 530 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 USP17L21D6R901 530 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 NSFP46459 744 aaKnown RBP12.62□□□□□ -0.39
VCL-202ENST00000372755 TFDP1Q14186 410 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 IFNL3Q8IZI9 196 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 TPCN1Q9ULQ1 816 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 SCG2P13521 617 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 CMA1P23946 247 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 POLR2FP61218 127 aaKnown RBP12.62□□□□□ -0.39
VCL-202ENST00000372755 PPARDQ03181 441 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 FANCBQ8NB91 859 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 HDAC11Q96DB2 347 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 IFT122Q9HBG6 1241 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 PPP2R2CQ9Y2T4 447 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 ARHGEF10O15013 1369 aa12.62□□□□□ -0.39
VCL-202ENST00000372755 TRAPPC8Q9Y2L5 1435 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 BUB1O43683 1085 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 PFKFB2O60825 505 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 TTC4O95801 387 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 SRGAP2BP0DMP2 458 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 LONP1P36776 959 aaKnown RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 ADAM9Q13443 819 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 BBS5Q8N3I7 341 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 LRGUKQ96M69 825 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 ERVV-2B6SEH9 535 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 XPOTO43592 962 aaKnown RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 BRD1O95696 1058 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 ME3Q16798 604 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 PLA2G4DQ86XP0 818 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 DACT3Q96B18 629 aaPredicted RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 DPH5Q9H2P9 285 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 TESK2Q96S53 571 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 PLEKHA4Q9H4M7 779 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 ANAPC5Q9UJX4 755 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 BZW2Q9Y6E2 419 aaKnown RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 NDUFB9Q9Y6M9 179 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 FRMPD2Q68DX3 1309 aaPredicted RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 EFCAB8A8MWE9 144 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 TLR3O15455 904 aaKnown RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 MFAP3P55082 362 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 SF3A3Q12874 501 aaKnown RBP eCLIP12.61□□□□□ -0.39
VCL-202ENST00000372755 RAB44Q7Z6P3 723 aaPredicted RBP12.61□□□□□ -0.39
VCL-202ENST00000372755 LRRC8CQ8TDW0 803 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 TRIM11Q96F44 468 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 CAPS2Q9BXY5 557 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 NEURL1BA8MQ27 555 aa12.61□□□□□ -0.39
VCL-202ENST00000372755 OPHN1O60890 802 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms