RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 LAD1O00515 517 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 PRPHP41219 470 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 PIP4K2BP78356 416 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 TTI2Q6NXR4 508 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 BARHL2Q9NY43 387 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 CNTNAP4Q9C0A0 1308 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 CDK5RAP2Q96SN8 1893 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 ZNF662Q6ZS27 426 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 BARGINQ6ZT62 677 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 DYNLL2Q96FJ2 89 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 TTYH3Q9C0H2 523 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 FLT1P17948 1338 aa14.33□□□□□ -0.12
CTPS1-202ENST00000372621 CCDC194A0A1B0GVG4 234 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 CTAGE15A4D2H0 777 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 PSMD14O00487 310 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 CTAGE8P0CG41 777 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 GTF2E1P29083 439 aaPredicted RBP14.32□□□□□ -0.12
CTPS1-202ENST00000372621 TM4SF1P30408 202 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 GNAQP50148 359 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 INF2Q27J81 1249 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 CTAGE6Q86UF2 777 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 CTAGE4Q8IX94 777 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 NLRP3Q96P20 1036 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 CALCOCO1Q9P1Z2 691 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 MYO6Q9UM54 1294 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 MEA1Q16626 185 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 SLC4A8Q2Y0W8 1093 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 TRAPPC11Q7Z392 1133 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 CCDC148Q8NFR7 591 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 NYXQ9GZU5 481 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 ABCB6Q9NP58 842 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 TRIM10Q9UDY6 481 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 LUC7L2Q9Y383 392 aaKnown RBP14.32□□□□□ -0.12
CTPS1-202ENST00000372621 USP17L3A6NCW0 530 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 USP17L4A6NCW7 530 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 PALM3A6NDB9 673 aaPredicted RBP14.32□□□□□ -0.12
CTPS1-202ENST00000372621 HERVK_113P62684 666 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 SPTY2D1Q68D10 685 aaPredicted RBP14.32□□□□□ -0.12
CTPS1-202ENST00000372621 SMIM5Q71RC9 77 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 USP17L1Q7RTZ2 530 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 HDXQ7Z353 690 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 DUSP9Q99956 384 aaKnown RBP14.32□□□□□ -0.12
CTPS1-202ENST00000372621 HAUS4Q9H6D7 363 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 JAG2Q9Y219 1238 aa14.32□□□□□ -0.12
CTPS1-202ENST00000372621 RASSF10A6NK89 507 aa14.31□□□□□ -0.12
CTPS1-202ENST00000372621 SRGNP10124 158 aa14.31□□□□□ -0.12
CTPS1-202ENST00000372621 VSNL1P62760 191 aa14.31□□□□□ -0.12
CTPS1-202ENST00000372621 CCDC178Q5BJE1 867 aa14.31□□□□□ -0.12
CTPS1-202ENST00000372621 DZIP1Q86YF9 867 aaKnown RBP14.31□□□□□ -0.12
CTPS1-202ENST00000372621 NOA1Q8NC60 698 aaKnown RBP14.31□□□□□ -0.12
CTPS1-202ENST00000372621 SH3RF3Q8TEJ3 882 aaPredicted RBP14.31□□□□□ -0.12
CTPS1-202ENST00000372621 PSMA7O14818 248 aa14.31□□□□□ -0.12
CTPS1-202ENST00000372621 UBA7P41226 1012 aa14.31□□□□□ -0.12
CTPS1-202ENST00000372621 HNRNPH2P55795 449 aaKnown RBP14.31□□□□□ -0.12
CTPS1-202ENST00000372621 TXLNBQ8N3L3 684 aa14.31□□□□□ -0.12
CTPS1-202ENST00000372621 DHTKD1Q96HY7 919 aaPredicted RBP14.31□□□□□ -0.12
CTPS1-202ENST00000372621 CUEDC2Q9H467 287 aa14.31□□□□□ -0.12
CTPS1-202ENST00000372621 PSD3Q9NYI0 1048 aa14.31□□□□□ -0.12
CTPS1-202ENST00000372621 ERLIN1O75477 346 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 DNM2P50570 870 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 KCNQ4P56696 695 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 NEK11Q8NG66 645 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 NOC3LQ8WTT2 800 aaKnown RBP14.3□□□□□ -0.12
CTPS1-202ENST00000372621 MAGEF1Q9HAY2 307 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 NARFQ9UHQ1 456 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 TNRC6CQ9HCJ0 1690 aaKnown RBP14.3□□□□□ -0.12
CTPS1-202ENST00000372621 TUBBP07437 444 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 RHOXF2BP0C7M4 288 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 STIM1Q13586 685 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 NCAPH2Q6IBW4 605 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 WDR93Q6P2C0 686 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 HEATR3Q7Z4Q2 680 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 EXOC4Q96A65 974 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 TRIM47Q96LD4 638 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 RHOXF2Q9BQY4 288 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 ZMYND12Q9H0C1 365 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 SUGCTQ9HAC7 445 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 ADAM21Q9UKJ8 722 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 GUCA1BQ9UMX6 200 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 DDX60LQ5H9U9 1706 aaKnown RBP14.3□□□□□ -0.12
CTPS1-202ENST00000372621 AK8Q96MA6 479 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 PLIN2Q99541 437 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 TMEM47Q9BQJ4 181 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 PDE11AQ9HCR9 933 aa14.3□□□□□ -0.12
CTPS1-202ENST00000372621 PPP4CP60510 307 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 PAPD7Q5XG87 772 aaKnown RBP14.29□□□□□ -0.12
CTPS1-202ENST00000372621 SETDB2Q96T68 719 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 MKNK2Q9HBH9 465 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 B4DLN1 442 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 TSPY3P0CV98 308 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 TSPY8P0CW00 308 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 PLCG1P19174 1290 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 GYS2P54840 703 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 NBPF5PQ86XG9 351 aaPredicted RBP14.29□□□□□ -0.12
CTPS1-202ENST00000372621 TUBGCP2Q9BSJ2 902 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 TRIM9Q9C026 710 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 AGPAT5Q9NUQ2 364 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 EXOC1Q9NV70 894 aa14.29□□□□□ -0.12
CTPS1-202ENST00000372621 RASA1P20936 1047 aa14.28□□□□□ -0.12
CTPS1-202ENST00000372621 MCM6Q14566 821 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms