RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 PPP2R3BQ9Y5P8 575 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 TMEM232C9JQI7 657 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 ADCY7P51828 1080 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 ZNF174Q15697 407 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 QRICH1Q2TAL8 776 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 SYDE2Q5VT97 1194 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 C9orf131Q5VYM1 1079 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 DCAF15Q66K64 600 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 VCPKMTQ9H867 229 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 ATP2C1P98194 919 aaPredicted RBP20.6■□□□□ 0.89
CD40-202ENST00000372285 KIAA1755Q5JYT7 1200 aa20.6■□□□□ 0.89
CD40-202ENST00000372285 REXO1Q8N1G1 1221 aaKnown RBP20.6■□□□□ 0.89
CD40-202ENST00000372285 FERMT2Q96AC1 680 aa20.6■□□□□ 0.89
CD40-202ENST00000372285 RIC8AQ9NPQ8 531 aa20.6■□□□□ 0.89
CD40-202ENST00000372285 GGA3Q9NZ52 723 aa20.6■□□□□ 0.89
CD40-202ENST00000372285 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.6■□□□□ 0.89
CD40-202ENST00000372285 ZNF112Q9UJU3 913 aa20.6■□□□□ 0.89
CD40-202ENST00000372285 PITPNM2Q9BZ72 1349 aa20.6■□□□□ 0.89
CD40-202ENST00000372285 CDC37Q16543 378 aaPredicted RBP20.59■□□□□ 0.89
CD40-202ENST00000372285 ZNF341Q9BYN7 854 aa20.59■□□□□ 0.89
CD40-202ENST00000372285 ADARB2Q9NS39 739 aaKnown RBP20.59■□□□□ 0.89
CD40-202ENST00000372285 PLA2G6O60733 806 aa20.58■□□□□ 0.89
CD40-202ENST00000372285 ZNF202O95125 648 aa20.58■□□□□ 0.89
CD40-202ENST00000372285 LMOD1P29536 600 aaPredicted RBP20.58■□□□□ 0.89
CD40-202ENST00000372285 PTGDRQ13258 359 aa20.58■□□□□ 0.89
CD40-202ENST00000372285 NONOQ15233 471 aaKnown RBP eCLIP20.58■□□□□ 0.89
CD40-202ENST00000372285 SPICE1Q8N0Z3 855 aa20.58■□□□□ 0.89
CD40-202ENST00000372285 TIGD1Q96MW7 591 aa20.58■□□□□ 0.89
CD40-202ENST00000372285 MRVI1Q9Y6F6 885 aa20.58■□□□□ 0.89
CD40-202ENST00000372285 GRIN1Q05586 938 aa20.58■□□□□ 0.88
CD40-202ENST00000372285 INF2Q27J81 1249 aa20.58■□□□□ 0.88
CD40-202ENST00000372285 CKAP2LQ8IYA6 745 aa20.58■□□□□ 0.88
CD40-202ENST00000372285 CCDC192P0DO97 292 aa20.57■□□□□ 0.88
CD40-202ENST00000372285 SYKP43405 635 aa20.57■□□□□ 0.88
CD40-202ENST00000372285 STAT2P52630 851 aa20.57■□□□□ 0.88
CD40-202ENST00000372285 IKQ13123 557 aaPredicted RBP20.57■□□□□ 0.88
CD40-202ENST00000372285 C4orf32Q8N8J7 132 aa20.57■□□□□ 0.88
CD40-202ENST00000372285 GLIS2Q9BZE0 524 aaPredicted RBP20.57■□□□□ 0.88
CD40-202ENST00000372285 GLT8D2Q9H1C3 349 aa20.57■□□□□ 0.88
CD40-202ENST00000372285 MCM7P33993 719 aa20.56■□□□□ 0.88
CD40-202ENST00000372285 MRPL12P52815 198 aaKnown RBP20.56■□□□□ 0.88
CD40-202ENST00000372285 FAM83BQ5T0W9 1011 aa20.56■□□□□ 0.88
CD40-202ENST00000372285 ARL6IP4Q66PJ3 421 aaKnown RBP20.56■□□□□ 0.88
CD40-202ENST00000372285 CHURC1Q8WUH1 139 aa20.56■□□□□ 0.88
CD40-202ENST00000372285 CUL5Q93034 780 aa20.56■□□□□ 0.88
CD40-202ENST00000372285 FAM13BQ9NYF5 915 aa20.56■□□□□ 0.88
CD40-202ENST00000372285 BIN2Q9UBW5 565 aaPredicted RBP20.56■□□□□ 0.88
CD40-202ENST00000372285 PRR12Q9ULL5 1215 aa20.56■□□□□ 0.88
CD40-202ENST00000372285 PCDHA1Q9Y5I3 950 aa20.56■□□□□ 0.88
CD40-202ENST00000372285 CLK2P49760 499 aaKnown RBP20.56■□□□□ 0.88
CD40-202ENST00000372285 CCDC84Q86UT8 332 aaPredicted RBP20.56■□□□□ 0.88
CD40-202ENST00000372285 AMNQ9BXJ7 453 aa20.56■□□□□ 0.88
CD40-202ENST00000372285 KIAA1683Q9H0B3 1180 aa20.56■□□□□ 0.88
CD40-202ENST00000372285 CSRNP2Q9H175 543 aa20.56■□□□□ 0.88
CD40-202ENST00000372285 KCNH3Q9ULD8 1083 aa20.56■□□□□ 0.88
CD40-202ENST00000372285 PHIPQ8WWQ0 1821 aa20.55■□□□□ 0.88
CD40-202ENST00000372285 INPP5BP32019 993 aa20.55■□□□□ 0.88
CD40-202ENST00000372285 TYRO3Q06418 890 aa20.55■□□□□ 0.88
CD40-202ENST00000372285 ORC2Q13416 577 aaPredicted RBP20.55■□□□□ 0.88
CD40-202ENST00000372285 JAKMIP3Q5VZ66 844 aa20.55■□□□□ 0.88
CD40-202ENST00000372285 FAM160B2Q86V87 743 aa20.55■□□□□ 0.88
CD40-202ENST00000372285 FBXO11Q86XK2 927 aa20.55■□□□□ 0.88
CD40-202ENST00000372285 SDF4Q9BRK5 362 aa20.55■□□□□ 0.88
CD40-202ENST00000372285 PSTPIP2Q9H939 334 aa20.55■□□□□ 0.88
CD40-202ENST00000372285 TMEM260Q9NX78 707 aa20.55■□□□□ 0.88
CD40-202ENST00000372285 MYH7BA7E2Y1 1941 aa20.55■□□□□ 0.88
CD40-202ENST00000372285 SSC5DA1L4H1 1573 aa20.54■□□□□ 0.88
CD40-202ENST00000372285 NEK8Q86SG6 692 aa20.54■□□□□ 0.88
CD40-202ENST00000372285 SCYL3Q8IZE3 742 aa20.54■□□□□ 0.88
CD40-202ENST00000372285 L3MBTL3Q96JM7 780 aaPredicted RBP20.54■□□□□ 0.88
CD40-202ENST00000372285 FEM1BQ9UK73 627 aa20.54■□□□□ 0.88
CD40-202ENST00000372285 LAD1O00515 517 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 TRAF1Q13077 416 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 ZYXQ15942 572 aaKnown RBP20.53■□□□□ 0.88
CD40-202ENST00000372285 SUPT20HL1Q3ZLR7 823 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 SPECC1Q5M775 1068 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 PRAMEF18Q5VWM3 479 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 TBCKQ8TEA7 893 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 LPAR1Q92633 364 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 FEZ1Q99689 392 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 SMCHD1A6NHR9 2005 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 ZC3H4Q9UPT8 1303 aaKnown RBP20.53■□□□□ 0.88
CD40-202ENST00000372285 DPY19L2Q6NUT2 758 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 SASS6Q6UVJ0 657 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 ELOA2Q8IYF1 753 aaPredicted RBP20.53■□□□□ 0.88
CD40-202ENST00000372285 WDR18Q9BV38 432 aa20.53■□□□□ 0.88
CD40-202ENST00000372285 WDR46O15213 610 aaKnown RBP20.52■□□□□ 0.88
CD40-202ENST00000372285 PRPHP41219 470 aa20.52■□□□□ 0.88
CD40-202ENST00000372285 SNAP25P60880 206 aa20.52■□□□□ 0.88
CD40-202ENST00000372285 WRNIP1Q96S55 665 aa20.52■□□□□ 0.88
CD40-202ENST00000372285 PANK2Q9BZ23 570 aa20.52■□□□□ 0.88
CD40-202ENST00000372285 RANBP17Q9H2T7 1088 aaKnown RBP20.52■□□□□ 0.88
CD40-202ENST00000372285 VWA3AA6NCI4 1184 aa20.51■□□□□ 0.87
CD40-202ENST00000372285 IL17AQ16552 155 aa20.51■□□□□ 0.87
CD40-202ENST00000372285 UBE2SQ16763 222 aa20.51■□□□□ 0.87
CD40-202ENST00000372285 MCTP2Q6DN12 878 aa20.51■□□□□ 0.87
CD40-202ENST00000372285 USP49Q70CQ1 688 aa20.51■□□□□ 0.87
CD40-202ENST00000372285 TEX2Q8IWB9 1127 aa20.51■□□□□ 0.87
CD40-202ENST00000372285 KLRG1Q96E93 195 aa20.51■□□□□ 0.87
CD40-202ENST00000372285 LONP1P36776 959 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms