RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 U2AF1L4Q8WU68 220 aaKnown RBP16.68■□□□□ 0.26
GTF3C4-201ENST00000372146 FGFR1OP2Q9NVK5 253 aa16.68■□□□□ 0.26
GTF3C4-201ENST00000372146 HFM1A2PYH4 1435 aa16.68■□□□□ 0.26
GTF3C4-201ENST00000372146 STAT2P52630 851 aa16.68■□□□□ 0.26
GTF3C4-201ENST00000372146 PICALMQ13492 652 aa16.68■□□□□ 0.26
GTF3C4-201ENST00000372146 TSTA3Q13630 321 aaPredicted RBP16.68■□□□□ 0.26
GTF3C4-201ENST00000372146 NCAPH2Q6IBW4 605 aa16.68■□□□□ 0.26
GTF3C4-201ENST00000372146 CCDC84Q86UT8 332 aaPredicted RBP16.68■□□□□ 0.26
GTF3C4-201ENST00000372146 TRMT44Q8IYL2 757 aaKnown RBP16.68■□□□□ 0.26
GTF3C4-201ENST00000372146 CDKL2Q92772 493 aa16.68■□□□□ 0.26
GTF3C4-201ENST00000372146 SGK1O00141 431 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 TOM1L1O75674 476 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 GPTP24298 496 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 NONOQ15233 471 aaKnown RBP eCLIP16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 ZC3H12BQ5HYM0 836 aaKnown RBP16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 DBF4Q9UBU7 674 aaPredicted RBP16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 PCF11O94913 1555 aaKnown RBP16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 AP2B1P63010 937 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 SF3B3Q15393 1217 aaKnown RBP16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 EXOC5O00471 708 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 GYG2O15488 501 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 NR1D1P20393 614 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 EPHB4P54760 987 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 ITKQ08881 620 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 GOLGA8FQ08AF8 430 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 GOLGA8DPQ0D2H9 430 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 RIOK1Q9BRS2 568 aaKnown RBP16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 CCDC90BQ9GZT6 254 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 KCNJ18B7U540 433 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 C6orf229H3BNL8 230 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 VCAM1P19320 739 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 YWHAGP61981 247 aaKnown RBP eCLIP16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 KCNJ12Q14500 433 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 ARIH1Q9Y4X5 557 aaPredicted RBP16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 ENO4A6NNW6 628 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 LRMPQ12912 555 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 MCUQ8NE86 351 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 CDC5LQ99459 802 aaKnown RBP16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 NOP9Q86U38 636 aaKnown RBP16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 TAB3Q8N5C8 712 aaPredicted RBP16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 KIF11P52732 1056 aa16.67■□□□□ 0.26
GTF3C4-201ENST00000372146 DCTN3O75935 186 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 NNTQ13423 1086 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 CATSPER3Q86XQ3 398 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 PTPN23Q9H3S7 1636 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 LDHCP07864 332 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 C2orf54Q08AI8 447 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 RHBDL2Q9NX52 303 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 NOC2LQ9Y3T9 749 aaKnown RBP16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 WDR91A4D1P6 747 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 SNX5Q9Y5X3 404 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 MAEAQ7L5Y9 396 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 CCDC51Q96ER9 411 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 TXNDC2Q86VQ3 553 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 WDR75Q8IWA0 830 aaKnown RBP16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 NEUROG2Q9H2A3 272 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 NLRC4Q9NPP4 1024 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 EXOC7Q9UPT5 735 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 TEX2Q8IWB9 1127 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 ASCC2Q9H1I8 757 aaPredicted RBP16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 KIF21AQ7Z4S6 1674 aa16.66■□□□□ 0.26
GTF3C4-201ENST00000372146 MYSM1Q5VVJ2 828 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 HDDC2Q7Z4H3 204 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 RHPN1Q8TCX5 695 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 MAGEB6P1A0A0J9YX57 407 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 ZSCAN32Q9NX65 697 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 FSCBQ5H9T9 825 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 C1orf146Q5VVC0 180 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 HAUS3Q68CZ6 603 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 DHX32Q7L7V1 743 aaKnown RBP16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 KDM2BQ8NHM5 1336 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 ACTN3Q08043 901 aaPredicted RBP16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 CDAN1Q8IWY9 1227 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 PARP9Q8IXQ6 854 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 ARHGAP18Q8N392 663 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 PFDN6O15212 129 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 SCG2P13521 617 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 SLC9A5Q14940 896 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 RINT1Q6NUQ1 792 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 DAPK1P53355 1430 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 PRG4Q92954 1404 aaPredicted RBP16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 RHOBTB1O94844 696 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 ANGPTL8Q6UXH0 198 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 MAGEB6Q8N7X4 407 aa16.65■□□□□ 0.26
GTF3C4-201ENST00000372146 PDE1BQ01064 536 aa16.64■□□□□ 0.26
GTF3C4-201ENST00000372146 IQCB1Q15051 598 aa16.64■□□□□ 0.26
GTF3C4-201ENST00000372146 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.64■□□□□ 0.26
GTF3C4-201ENST00000372146 EPB41L5Q9HCM4 733 aa16.64■□□□□ 0.26
GTF3C4-201ENST00000372146 TTC41PQ6P2S7 1318 aa16.64■□□□□ 0.26
GTF3C4-201ENST00000372146 ATP8B1O43520 1251 aa16.64■□□□□ 0.25
GTF3C4-201ENST00000372146 CUTAO60888 179 aa16.64■□□□□ 0.25
GTF3C4-201ENST00000372146 ZFYVE1Q9HBF4 777 aa16.64■□□□□ 0.25
GTF3C4-201ENST00000372146 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
GTF3C4-201ENST00000372146 TTI1O43156 1089 aa16.64■□□□□ 0.25
GTF3C4-201ENST00000372146 WDR47O94967 919 aa16.64■□□□□ 0.25
GTF3C4-201ENST00000372146 TBC1D23Q9NUY8 699 aa16.64■□□□□ 0.25
GTF3C4-201ENST00000372146 GOLGA4Q13439 2230 aaKnown RBP16.64■□□□□ 0.25
GTF3C4-201ENST00000372146 ATP5J2-PTCD1G3V325 749 aa16.64■□□□□ 0.25
GTF3C4-201ENST00000372146 E2F6O75461 281 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms