RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 NFIAQ12857 509 aa16.13■□□□□ 0.17
LDB3-204ENST00000372066 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
LDB3-204ENST00000372066 SLF2Q8IX21 1173 aa16.13■□□□□ 0.17
LDB3-204ENST00000372066 BPIFA3Q9BQP9 254 aa16.13■□□□□ 0.17
LDB3-204ENST00000372066 HPSEQ9Y251 543 aa16.13■□□□□ 0.17
LDB3-204ENST00000372066 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.13■□□□□ 0.17
LDB3-204ENST00000372066 ZNF202O95125 648 aa16.12■□□□□ 0.17
LDB3-204ENST00000372066 PFKFB1P16118 471 aa16.12■□□□□ 0.17
LDB3-204ENST00000372066 PLCG2P16885 1265 aa16.12■□□□□ 0.17
LDB3-204ENST00000372066 IQCB1Q15051 598 aa16.12■□□□□ 0.17
LDB3-204ENST00000372066 CTCFLQ8NI51 663 aaPredicted RBP16.12■□□□□ 0.17
LDB3-204ENST00000372066 KIAA1468Q9P260 1216 aa16.12■□□□□ 0.17
LDB3-204ENST00000372066 ZNF112Q9UJU3 913 aa16.12■□□□□ 0.17
LDB3-204ENST00000372066 MROH7-TTC4A0A0A0MT08 1334 aa16.12■□□□□ 0.17
LDB3-204ENST00000372066 HTTP42858 3142 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 BMP15O95972 392 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 USP5P45974 858 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 TERF1P54274 439 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 PLCB2Q00722 1185 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 TROAPQ12815 778 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 RESP18Q5W5W9 173 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 TMTC3Q6ZXV5 915 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 PLA2G4DQ86XP0 818 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 SH3TC2Q8TF17 1288 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 BRMS1Q9HCU9 246 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 CPA4Q9UI42 421 aa16.11■□□□□ 0.17
LDB3-204ENST00000372066 CYP2D7A0A087X1C5 515 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 PDHXO00330 501 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 GNRH1P01148 92 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 KIF5BP33176 963 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 SYKP43405 635 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 FUT2Q10981 343 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 C12orf60Q5U649 245 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 C17orf99Q6UX52 265 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 ANKRD23Q86SG2 305 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 KRI1Q8N9T8 703 aaKnown RBP16.1■□□□□ 0.17
LDB3-204ENST00000372066 ZNF579Q8NAF0 562 aaKnown RBP16.1■□□□□ 0.17
LDB3-204ENST00000372066 ANKS1AQ92625 1134 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 MCM9Q9NXL9 1143 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 FAM198AQ9UFP1 575 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 OTOFQ9HC10 1997 aa16.1■□□□□ 0.17
LDB3-204ENST00000372066 TSPY2A6NKD2 308 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 BECN2A8MW95 431 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 BTBD18B2RXH4 712 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 AP5Z1O43299 807 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 GUCY1A2P33402 732 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 ZNF75DP51815 510 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 HABP4Q5JVS0 413 aaKnown RBP16.09■□□□□ 0.17
LDB3-204ENST00000372066 C11orf57Q6ZUT1 292 aaPredicted RBP16.09■□□□□ 0.17
LDB3-204ENST00000372066 ZFPM1Q8IX07 1006 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 FAM177A1Q8N128 213 aaPredicted RBP16.09■□□□□ 0.17
LDB3-204ENST00000372066 FAM163AQ96GL9 167 aaPredicted RBP16.09■□□□□ 0.17
LDB3-204ENST00000372066 PHF20Q9BVI0 1012 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 TCP11L1Q9NUJ3 509 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 HOOK1Q9UJC3 728 aaKnown RBP16.09■□□□□ 0.17
LDB3-204ENST00000372066 KCNH4Q9UQ05 1017 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 KIAA0100Q14667 2235 aaKnown RBP16.09■□□□□ 0.17
LDB3-204ENST00000372066 CNTNAP5Q8WYK1 1306 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 MYH8P13535 1937 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 KRT2P35908 639 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 PSMC4P43686 418 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 PRMT2P55345 433 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 PIBF1Q8WXW3 757 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 TRIM5Q9C035 493 aa16.09■□□□□ 0.17
LDB3-204ENST00000372066 PRDM1O75626 825 aa16.08■□□□□ 0.16
LDB3-204ENST00000372066 PTPREP23469 700 aa16.08■□□□□ 0.16
LDB3-204ENST00000372066 HOXD10P28358 340 aa16.08■□□□□ 0.16
LDB3-204ENST00000372066 MARCKSP29966 332 aaPredicted RBP16.08■□□□□ 0.16
LDB3-204ENST00000372066 GNAQP50148 359 aa16.08■□□□□ 0.16
LDB3-204ENST00000372066 NLRP12P59046 1061 aa16.08■□□□□ 0.16
LDB3-204ENST00000372066 TPM4P67936 248 aa16.08■□□□□ 0.16
LDB3-204ENST00000372066 PKN1Q16512 942 aa16.08■□□□□ 0.16
LDB3-204ENST00000372066 NOL9Q5SY16 702 aaKnown RBP16.08■□□□□ 0.16
LDB3-204ENST00000372066 MRFAP1L1Q96HT8 127 aa16.08■□□□□ 0.16
LDB3-204ENST00000372066 FAM13BQ9NYF5 915 aa16.08■□□□□ 0.16
LDB3-204ENST00000372066 GPR75-ASB3A0A0A6YYF3 556 aa16.07■□□□□ 0.16
LDB3-204ENST00000372066 CXCL11O14625 94 aa16.07■□□□□ 0.16
LDB3-204ENST00000372066 SHC4Q6S5L8 630 aa16.07■□□□□ 0.16
LDB3-204ENST00000372066 ZSCAN29Q8IWY8 852 aaPredicted RBP16.07■□□□□ 0.16
LDB3-204ENST00000372066 SRRDQ9UH36 339 aa16.07■□□□□ 0.16
LDB3-204ENST00000372066 TUBE1Q9UJT0 475 aa16.07■□□□□ 0.16
LDB3-204ENST00000372066 KCNJ14Q9UNX9 436 aa16.07■□□□□ 0.16
LDB3-204ENST00000372066 SMTNL1A8MU46 457 aa16.06■□□□□ 0.16
LDB3-204ENST00000372066 CTGFP29279 349 aa16.06■□□□□ 0.16
LDB3-204ENST00000372066 TOB1P50616 345 aaPredicted RBP16.06■□□□□ 0.16
LDB3-204ENST00000372066 MOGSQ13724 837 aa16.06■□□□□ 0.16
LDB3-204ENST00000372066 RAET1EQ8TD07 263 aa16.06■□□□□ 0.16
LDB3-204ENST00000372066 SH3RF3Q8TEJ3 882 aaPredicted RBP16.06■□□□□ 0.16
LDB3-204ENST00000372066 CCDC34Q96HJ3 373 aa16.06■□□□□ 0.16
LDB3-204ENST00000372066 TRIM47Q96LD4 638 aa16.06■□□□□ 0.16
LDB3-204ENST00000372066 IDI2Q9BXS1 227 aa16.06■□□□□ 0.16
LDB3-204ENST00000372066 KAT14Q9H8E8 782 aa16.06■□□□□ 0.16
LDB3-204ENST00000372066 PICK1Q9NRD5 415 aa16.06■□□□□ 0.16
LDB3-204ENST00000372066 ZHX2Q9Y6X8 837 aa16.06■□□□□ 0.16
LDB3-204ENST00000372066 CENPFP49454 3210 aa16.06■□□□□ 0.16
LDB3-204ENST00000372066 GAKO14976 1311 aa16.05■□□□□ 0.16
LDB3-204ENST00000372066 MKI67P46013 3256 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms