RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 JAKMIP3Q5VZ66 844 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 ZNF341Q9BYN7 854 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 GRPEL1Q9HAV7 217 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 PTPRFP10586 1907 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 ADM5C9JUS6 153 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 ASNSP08243 561 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 PTPREP23469 700 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 CMA1P23946 247 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 SYDE2Q5VT97 1194 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 RESP18Q5W5W9 173 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 RBM43Q6ZSC3 357 aaKnown RBP16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 APOBEC3FQ8IUX4 373 aaKnown RBP16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 C4orf32Q8N8J7 132 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 P2RX7Q99572 595 aaKnown RBP16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 VCPKMTQ9H867 229 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 DDX19AQ9NUU7 478 aaKnown RBP16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 FBXO28Q9NVF7 368 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 HPSEQ9Y251 543 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 MCM7P33993 719 aa16.13■□□□□ 0.17
HMGCS2-201ENST00000369406 BTNL9Q6UXG8 535 aa16.13■□□□□ 0.17
HMGCS2-201ENST00000369406 PRR12Q9ULL5 1215 aa16.13■□□□□ 0.17
HMGCS2-201ENST00000369406 COL11A1P12107 1806 aaPredicted RBP16.13■□□□□ 0.17
HMGCS2-201ENST00000369406 ESYT2A0FGR8 921 aa16.13■□□□□ 0.17
HMGCS2-201ENST00000369406 PTGDRQ13258 359 aa16.13■□□□□ 0.17
HMGCS2-201ENST00000369406 CCDC73Q6ZRK6 1079 aa16.13■□□□□ 0.17
HMGCS2-201ENST00000369406 KRI1Q8N9T8 703 aaKnown RBP16.13■□□□□ 0.17
HMGCS2-201ENST00000369406 ZNF112Q9UJU3 913 aa16.13■□□□□ 0.17
HMGCS2-201ENST00000369406 CUTAO60888 179 aa16.12■□□□□ 0.17
HMGCS2-201ENST00000369406 PRKG1Q13976 671 aa16.12■□□□□ 0.17
HMGCS2-201ENST00000369406 CSRNP2Q9H175 543 aa16.12■□□□□ 0.17
HMGCS2-201ENST00000369406 TMEM60Q9H2L4 133 aa16.12■□□□□ 0.17
HMGCS2-201ENST00000369406 TNMDQ9H2S6 317 aa16.12■□□□□ 0.17
HMGCS2-201ENST00000369406 C6orf50Q9HD87 102 aa16.12■□□□□ 0.17
HMGCS2-201ENST00000369406 ADARB2Q9NS39 739 aaKnown RBP16.12■□□□□ 0.17
HMGCS2-201ENST00000369406 SYNPO2Q9UMS6 1093 aa16.12■□□□□ 0.17
HMGCS2-201ENST00000369406 CCDC194A0A1B0GVG4 234 aa16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 OPLAHO14841 1288 aa16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 CTNND1O60716 968 aaKnown RBP16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 GPR162Q16538 588 aa16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 GALNT17Q6IS24 598 aa16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 RNF214Q8ND24 703 aa16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 NOL7Q9UMY1 257 aaKnown RBP16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 SRPRBQ9Y5M8 271 aaKnown RBP16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 A0A087X0B3 334 aa16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 FAM237AA0A1B0GTK4 181 aa16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 ADCY7P51828 1080 aa16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 ATP2C1P98194 919 aaPredicted RBP16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 IKQ13123 557 aaPredicted RBP16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 REXO1Q8N1G1 1221 aaKnown RBP16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 WRNIP1Q96S55 665 aa16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 GOPCQ9HD26 462 aa16.11■□□□□ 0.17
HMGCS2-201ENST00000369406 CLK2P49760 499 aaKnown RBP16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 MAP3K11Q16584 847 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 USH1GQ495M9 461 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 CCDC12Q8WUD4 166 aaPredicted RBP16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 TSPY26PQ9H489 355 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 RIC8AQ9NPQ8 531 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 PCDHA1Q9Y5I3 950 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 SCN4AP35499 1836 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 USP17L15C9J2P7 530 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 USP17L13C9JLJ4 530 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 USP17L11C9JVI0 530 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 USP17L18D6R9N7 530 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 USP17L22D6RA61 530 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 USP17L17D6RBQ6 530 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 USP17L19D6RCP7 530 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 USP17L20D6RJB6 530 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 hCG_1984214I3L0E3 225 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 ZNF202O95125 648 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 TRAPPC10P48553 1259 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 USP17L24Q0WX57 530 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 USP17L6PQ6QN14 398 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 ZNF713Q8N859 430 aaPredicted RBP16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 JMYQ8N9B5 988 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 EPSTI1Q96J88 318 aa16.1■□□□□ 0.17
HMGCS2-201ENST00000369406 POTECB2RU33 542 aa16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 LMOD1P29536 600 aaPredicted RBP16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 GNA11P29992 359 aa16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 MTMR2Q13614 643 aa16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 FAM177A1Q8N128 213 aaPredicted RBP16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 TBCKQ8TEA7 893 aa16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 KLRG1Q96E93 195 aa16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 STAT2P52630 851 aa16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 PPP1R18Q6NYC8 613 aa16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 KIFC2Q96AC6 838 aa16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 L3MBTL3Q96JM7 780 aaPredicted RBP16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 FEZ1Q99689 392 aa16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 EMILIN3Q9NT22 766 aa16.09■□□□□ 0.17
HMGCS2-201ENST00000369406 PITPNM2Q9BZ72 1349 aa16.08■□□□□ 0.17
HMGCS2-201ENST00000369406 FOXN1O15353 648 aa16.08■□□□□ 0.17
HMGCS2-201ENST00000369406 MRE11P49959 708 aa16.08■□□□□ 0.17
HMGCS2-201ENST00000369406 NONOQ15233 471 aaKnown RBP eCLIP16.08■□□□□ 0.17
HMGCS2-201ENST00000369406 KRT25Q7Z3Z0 450 aa16.08■□□□□ 0.17
HMGCS2-201ENST00000369406 SCYL3Q8IZE3 742 aa16.08■□□□□ 0.17
HMGCS2-201ENST00000369406 MORC2Q9Y6X9 1032 aaPredicted RBP16.08■□□□□ 0.17
HMGCS2-201ENST00000369406 VWA3AA6NCI4 1184 aa16.08■□□□□ 0.16
HMGCS2-201ENST00000369406 KINO60870 393 aaKnown RBP16.08■□□□□ 0.16
HMGCS2-201ENST00000369406 USP2O75604 605 aaPredicted RBP16.08■□□□□ 0.16
HMGCS2-201ENST00000369406 PTPRAP18433 802 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms