RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SOS2Q07890 1332 aaPredicted RBP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 BEND3Q5T5X7 828 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 EFCAB13Q8IY85 973 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 PHKBQ93100 1093 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 TRIM56Q9BRZ2 755 aaKnown RBP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 NCOA5Q9HCD5 579 aaKnown RBP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 ARMCX3Q9UH62 379 aaPredicted RBP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 SKIV2LQ15477 1246 aaKnown RBP12.03□□□□□ -0.48
CLIP1-203ENST00000361654 RINT1Q6NUQ1 792 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 SMC5Q8IY18 1101 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 KRT222Q8N1A0 295 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 TRIML1Q8N9V2 468 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 NELFBQ8WX92 580 aa12.03□□□□□ -0.48
CLIP1-203ENST00000361654 EBAG9O00559 213 aa12.02□□□□□ -0.48
CLIP1-203ENST00000361654 RAD17O75943 681 aa12.02□□□□□ -0.48
CLIP1-203ENST00000361654 ARHGAP24Q8N264 748 aa12.02□□□□□ -0.48
CLIP1-203ENST00000361654 ELMOD1Q8N336 334 aa12.02□□□□□ -0.48
CLIP1-203ENST00000361654 POMGNT1Q8WZA1 660 aa12.02□□□□□ -0.48
CLIP1-203ENST00000361654 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.48
CLIP1-203ENST00000361654 KDRP35968 1356 aa12.02□□□□□ -0.48
CLIP1-203ENST00000361654 WDR64B1ANS9 1081 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 OR52Z1P0C646 297 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 RHOXF2BP0C7M4 288 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 PDE6AP16499 860 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 GBP6Q6ZN66 633 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 NOP9Q86U38 636 aaKnown RBP12.02□□□□□ -0.49
CLIP1-203ENST00000361654 GRK7Q8WTQ7 553 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 RHOXF2Q9BQY4 288 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 KCNJ14Q9UNX9 436 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 PARD3Q8TEW0 1356 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 DLATP10515 647 aaKnown RBP12.02□□□□□ -0.49
CLIP1-203ENST00000361654 KRT15P19012 456 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 RBBP5Q15291 538 aaKnown RBP12.02□□□□□ -0.49
CLIP1-203ENST00000361654 CTAGE3PQ8IX95 158 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 PPP2R3CQ969Q6 453 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 RBSNQ9H1K0 784 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 VCXQ9H320 206 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 DBNDD1Q9H9R9 158 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 UGGT2Q9NYU1 1516 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 PHBP35232 272 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 ARPP19P56211 112 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 RC3H1Q5TC82 1133 aaKnown RBP12.02□□□□□ -0.49
CLIP1-203ENST00000361654 CCDC62Q6P9F0 684 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 RUFY4Q6ZNE9 571 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 NDUFAF2Q8N183 169 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 AMFRQ9UKV5 643 aa12.02□□□□□ -0.49
CLIP1-203ENST00000361654 USP17L3A6NCW0 530 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 USP17L4A6NCW7 530 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 TTLL1O95922 423 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 GKAP1Q5VSY0 366 aaPredicted RBP12.01□□□□□ -0.49
CLIP1-203ENST00000361654 USP17L1Q7RTZ2 530 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 FAM160B2Q86V87 743 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 NLRP7Q8WX94 980 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 FAM81BQ96LP2 452 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 FAM227BQ96M60 508 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 VCX3BQ9H321 246 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 SLITRK6Q9H5Y7 841 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 VPS37BQ9H9H4 285 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 DISC1Q9NRI5 854 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 RIPOR2Q9Y4F9 1068 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 HNRNPDLO14979 420 aaKnown RBP12.01□□□□□ -0.49
CLIP1-203ENST00000361654 PPP2R5EQ16537 467 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 USP26Q9BXU7 913 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 DPYSL4O14531 572 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 PIK3CAP42336 1068 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 LRCH2Q5VUJ6 765 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 PPP1R2P3Q6NXS1 205 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 FASTKD5Q7L8L6 764 aaKnown RBP12.01□□□□□ -0.49
CLIP1-203ENST00000361654 SPDYE1Q8NFV5 336 aaPredicted RBP12.01□□□□□ -0.49
CLIP1-203ENST00000361654 FAM76AQ8TAV0 307 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 MASTLQ96GX5 879 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 SGSM2O43147 1006 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 GSTA1P08263 222 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 GSTA2P09210 222 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 SCG2P13521 617 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 SEPT10Q9P0V9 454 aa12.01□□□□□ -0.49
CLIP1-203ENST00000361654 IQCA1LA6NCM1 817 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 E7EWF7 191 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 MNAT1P51948 309 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 FANCBQ8NB91 859 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 PANK4Q9NVE7 773 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 BAG5Q9UL15 447 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 ATP10DQ9P241 1426 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 PSMD6Q15008 389 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 CHMP6Q96FZ7 201 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 ZNF577Q9BSK1 485 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 TAB2Q9NYJ8 693 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 TNKSO95271 1327 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 SPDYE2BA6NHP3 402 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 ZBTB7BO15156 539 aaPredicted RBP12□□□□□ -0.49
CLIP1-203ENST00000361654 IFNB1P01574 187 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 SPDYE6P0CI01 402 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 BMP3P12645 472 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 PTK2Q05397 1052 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 MYO1EQ12965 1108 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
CLIP1-203ENST00000361654 SH2D4BQ5SQS7 431 aa12□□□□□ -0.49
CLIP1-203ENST00000361654 U2AF1L4Q8WU68 220 aaKnown RBP12□□□□□ -0.49
CLIP1-203ENST00000361654 RAB17Q9H0T7 212 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms