RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 LOC285556D6RIA3 1793 aa19.6■□□□□ 0.73
LMNA-202ENST00000361308 XBP1P17861 261 aa19.6■□□□□ 0.73
LMNA-202ENST00000361308 PDCP20941 246 aa19.6■□□□□ 0.73
LMNA-202ENST00000361308 CCDC174Q6PII3 467 aa19.6■□□□□ 0.73
LMNA-202ENST00000361308 HEATR3Q7Z4Q2 680 aa19.6■□□□□ 0.73
LMNA-202ENST00000361308 FAM43AQ8N2R8 423 aa19.6■□□□□ 0.73
LMNA-202ENST00000361308 SLC38A10Q9HBR0 1119 aa19.6■□□□□ 0.73
LMNA-202ENST00000361308 KIF23Q02241 960 aaPredicted RBP19.59■□□□□ 0.73
LMNA-202ENST00000361308 OTUD7BQ6GQQ9 843 aa19.59■□□□□ 0.73
LMNA-202ENST00000361308 AMNQ9BXJ7 453 aa19.59■□□□□ 0.73
LMNA-202ENST00000361308 HERVK_113P62684 666 aa19.59■□□□□ 0.73
LMNA-202ENST00000361308 HTRA3P83110 453 aa19.59■□□□□ 0.73
LMNA-202ENST00000361308 TRAF1Q13077 416 aa19.59■□□□□ 0.73
LMNA-202ENST00000361308 TRIM29Q14134 588 aa19.59■□□□□ 0.73
LMNA-202ENST00000361308 FBXO11Q86XK2 927 aa19.59■□□□□ 0.73
LMNA-202ENST00000361308 CPXCR1Q8N123 301 aa19.59■□□□□ 0.73
LMNA-202ENST00000361308 GPKOWQ92917 476 aaPredicted RBP eCLIP19.59■□□□□ 0.731e-9■■■■□ 23.2
LMNA-202ENST00000361308 C8orf76Q96K31 380 aa19.59■□□□□ 0.73
LMNA-202ENST00000361308 hCG_1984214I3L0E3 225 aa19.58■□□□□ 0.72
LMNA-202ENST00000361308 CYP2C8P10632 490 aa19.58■□□□□ 0.72
LMNA-202ENST00000361308 TM4SF4P48230 202 aa19.58■□□□□ 0.72
LMNA-202ENST00000361308 WWC2Q6AWC2 1192 aa19.58■□□□□ 0.72
LMNA-202ENST00000361308 IFNL1Q8IU54 200 aa19.58■□□□□ 0.72
LMNA-202ENST00000361308 ZNF713Q8N859 430 aaPredicted RBP19.58■□□□□ 0.72
LMNA-202ENST00000361308 SMCR8Q8TEV9 937 aaPredicted RBP19.58■□□□□ 0.72
LMNA-202ENST00000361308 ZIC5Q96T25 663 aa19.58■□□□□ 0.72
LMNA-202ENST00000361308 BARHL2Q9NY43 387 aa19.58■□□□□ 0.72
LMNA-202ENST00000361308 PCDHA1Q9Y5I3 950 aa19.58■□□□□ 0.72
LMNA-202ENST00000361308 H3BQV1 296 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 PPP1R11O60927 126 aaPredicted RBP19.57■□□□□ 0.72
LMNA-202ENST00000361308 ICAM1P05362 532 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 PDIA4P13667 645 aaKnown RBP19.57■□□□□ 0.72
LMNA-202ENST00000361308 SYT1P21579 422 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 FOSBP53539 338 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 C1QTNF8P60827 252 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 USH1GQ495M9 461 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 IFFO2Q5TF58 517 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 LBX2Q6XYB7 198 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 MB21D1Q8N884 522 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 COA7Q96BR5 231 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 RAVER2Q9HCJ3 691 aaKnown RBP19.57■□□□□ 0.72
LMNA-202ENST00000361308 ZCCHC17Q9NP64 241 aaKnown RBP19.57■□□□□ 0.72
LMNA-202ENST00000361308 SH3GLB2Q9NR46 395 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 VPS54Q9P1Q0 977 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 PNMA2Q9UL42 364 aa19.57■□□□□ 0.72
LMNA-202ENST00000361308 WDR33Q9C0J8 1336 aaKnown RBP19.57■□□□□ 0.72
LMNA-202ENST00000361308 IGF2BP3O00425 579 aaKnown RBP eCLIP19.56■□□□□ 0.72
LMNA-202ENST00000361308 AOC2O75106 756 aa19.56■□□□□ 0.72
LMNA-202ENST00000361308 OAZ1P54368 228 aa19.56■□□□□ 0.72
LMNA-202ENST00000361308 REM2Q8IYK8 340 aaPredicted RBP19.56■□□□□ 0.72
LMNA-202ENST00000361308 CCDC12Q8WUD4 166 aaPredicted RBP19.56■□□□□ 0.72
LMNA-202ENST00000361308 PARK7Q99497 189 aaKnown RBP19.56■□□□□ 0.72
LMNA-202ENST00000361308 GJB4Q9NTQ9 266 aa19.56■□□□□ 0.72
LMNA-202ENST00000361308 ZNF536O15090 1300 aa19.56■□□□□ 0.72
LMNA-202ENST00000361308 STXBP3O00186 592 aa19.56■□□□□ 0.72
LMNA-202ENST00000361308 NAPAP54920 295 aa19.56■□□□□ 0.72
LMNA-202ENST00000361308 FBXO18Q8NFZ0 1043 aa19.56■□□□□ 0.72
LMNA-202ENST00000361308 GTF3C2Q8WUA4 911 aaPredicted RBP19.56■□□□□ 0.72
LMNA-202ENST00000361308 AGBL1Q96MI9 1066 aa19.56■□□□□ 0.72
LMNA-202ENST00000361308 CCPG1Q9ULG6 757 aa19.56■□□□□ 0.72
LMNA-202ENST00000361308 STX6O43752 255 aa19.55■□□□□ 0.72
LMNA-202ENST00000361308 NLRP5P59047 1200 aa19.55■□□□□ 0.72
LMNA-202ENST00000361308 GUCY1B3Q02153 619 aa19.55■□□□□ 0.72
LMNA-202ENST00000361308 PLS1Q14651 629 aa19.55■□□□□ 0.72
LMNA-202ENST00000361308 TMEM132BQ14DG7 1078 aa19.55■□□□□ 0.72
LMNA-202ENST00000361308 KRT40Q6A162 431 aa19.55■□□□□ 0.72
LMNA-202ENST00000361308 REPS2Q8NFH8 660 aa19.55■□□□□ 0.72
LMNA-202ENST00000361308 CCDC148Q8NFR7 591 aa19.55■□□□□ 0.72
LMNA-202ENST00000361308 ATP2A1O14983 1001 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 HSPA6P17066 643 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 STAT3P40763 770 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 VEGFBP49765 207 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 TYW1BQ6NUM6 668 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 FAM177A1Q8N128 213 aaPredicted RBP19.54■□□□□ 0.72
LMNA-202ENST00000361308 RGS22Q8NE09 1264 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 PAGR1Q9BTK6 254 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 RBPJLQ9UBG7 517 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 ZNF214Q9UL59 606 aaPredicted RBP19.54■□□□□ 0.72
LMNA-202ENST00000361308 KCNJ14Q9UNX9 436 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 RABGAP1Q9Y3P9 1069 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 VPS37CA5D8V6 355 aaPredicted RBP19.54■□□□□ 0.72
LMNA-202ENST00000361308 DDIT3P35638 169 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 MAP2K2P36507 400 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 GCLCP48506 637 aaPredicted RBP19.54■□□□□ 0.72
LMNA-202ENST00000361308 TAF1CQ15572 869 aaPredicted RBP19.54■□□□□ 0.72
LMNA-202ENST00000361308 POTEEQ6S8J3 1075 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 TEX13BQ9BXU2 312 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 BTBD7Q9P203 1132 aa19.54■□□□□ 0.72
LMNA-202ENST00000361308 MYH6P13533 1939 aa19.53■□□□□ 0.72
LMNA-202ENST00000361308 RLFQ13129 1914 aa19.53■□□□□ 0.72
LMNA-202ENST00000361308 SMCO2A6NFE2 343 aa19.53■□□□□ 0.72
LMNA-202ENST00000361308 ALAS1P13196 640 aa19.53■□□□□ 0.72
LMNA-202ENST00000361308 SNRNP48Q6IEG0 339 aaKnown RBP19.53■□□□□ 0.72
LMNA-202ENST00000361308 PPP1R18Q6NYC8 613 aa19.53■□□□□ 0.72
LMNA-202ENST00000361308 PHF20Q9BVI0 1012 aa19.53■□□□□ 0.72
LMNA-202ENST00000361308 ZMYND12Q9H0C1 365 aa19.53■□□□□ 0.72
LMNA-202ENST00000361308 C6orf50Q9HD87 102 aa19.53■□□□□ 0.72
LMNA-202ENST00000361308 MRPL11Q9Y3B7 192 aaKnown RBP19.53■□□□□ 0.72
LMNA-202ENST00000361308 ABCB11O95342 1321 aa19.52■□□□□ 0.72
LMNA-202ENST00000361308 ALDH1A1P00352 501 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms