RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 RASSF2P50749 326 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 GNPTABQ3T906 1256 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 EAPPQ56P03 285 aaPredicted RBP13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 ARHGEF16Q5VV41 709 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 PHLDB3Q6NSJ2 640 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 EAF2Q96CJ1 260 aaPredicted RBP13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 USP28Q96RU2 1077 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 TSKSQ9UJT2 592 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 BTDP43251 543 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 SDR42E1Q8WUS8 393 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 KIAA1468Q9P260 1216 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 LRRC24Q50LG9 513 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 MYSM1Q5VVJ2 828 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 GPBP1Q86WP2 473 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 AMFRQ9UKV5 643 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 BCS1LQ9Y276 419 aa13.41□□□□□ -0.26
CCDC144A-204ENST00000360524 RGS16O15492 202 aaPredicted RBP13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 TNNI1P19237 187 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 DBN1Q16643 649 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 FAM102BQ5T8I3 360 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 ADALQ6DHV7 355 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 CCDC84Q86UT8 332 aaPredicted RBP13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 CCDC13Q8IYE1 715 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 GPKOWQ92917 476 aaPredicted RBP eCLIP13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 PSTPIP2Q9H939 334 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 MED4Q9NPJ6 270 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 FAF1Q9UNN5 650 aaPredicted RBP13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 KRIT1O00522 736 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 HSPD1P10809 573 aaKnown RBP13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 STX2P32856 288 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 VPS41P49754 854 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 LRRC8AQ8IWT6 810 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 NUCKS1Q9H1E3 243 aaKnown RBP13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 TCP10L2B9ZVM9 353 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 GLG1Q92896 1179 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 IQCDQ96DY2 449 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 SCNN1DP51172 638 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 NDUFA8P51970 172 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 DOK7Q18PE1 504 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 NOSTRINQ8IVI9 506 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 DEPTORQ8TB45 409 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 SLC5A4Q9NY91 659 aa13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 MRPL11Q9Y3B7 192 aaKnown RBP13.4□□□□□ -0.26
CCDC144A-204ENST00000360524 RNF40O75150 1001 aa13.4□□□□□ -0.27
CCDC144A-204ENST00000360524 CERKLQ49MI3 558 aaPredicted RBP13.4□□□□□ -0.27
CCDC144A-204ENST00000360524 USPL1Q5W0Q7 1092 aa13.4□□□□□ -0.27
CCDC144A-204ENST00000360524 FANCBQ8NB91 859 aa13.4□□□□□ -0.27
CCDC144A-204ENST00000360524 IWS1Q96ST2 819 aa13.4□□□□□ -0.27
CCDC144A-204ENST00000360524 JPH2Q9BR39 696 aaPredicted RBP13.4□□□□□ -0.27
CCDC144A-204ENST00000360524 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.27
CCDC144A-204ENST00000360524 MED23Q9ULK4 1368 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 TNKSO95271 1327 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 TESPA1A2RU30 521 aaPredicted RBP13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 POLR2MP0CAP2 368 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 GOLGA8HP0CJ92 632 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 E2F5Q15329 346 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 DCAF15Q66K64 600 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 FANCLQ9NW38 375 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 PFKFB2O60825 505 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 DDAH1O94760 285 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 P4HA1P13674 534 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 YWHAEP62258 255 aaKnown RBP13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 CTAGE3PQ8IX95 158 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 PNMA1Q8ND90 353 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 GABPB2Q8TAK5 448 aaPredicted RBP13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 ARHGEF5Q12774 1597 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 SEC31AO94979 1220 aaKnown RBP13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 SLFN12Q8IYM2 578 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 PAGR1Q9BTK6 254 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 MLXIPQ9HAP2 919 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 PYCARDQ9ULZ3 195 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 ALAS1P13196 640 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 SESN3P58005 492 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 GAS2L3Q86XJ1 694 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 PALM2Q8IXS6 379 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 MORC4Q8TE76 937 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 RSAD2Q8WXG1 361 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 KRT12Q99456 494 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 RAB17Q9H0T7 212 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 AFG3L2Q9Y4W6 797 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 SAMD9Q5K651 1589 aa13.39□□□□□ -0.27
CCDC144A-204ENST00000360524 A0A087WUV0 522 aaPredicted RBP13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 PRR16Q569H4 304 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 HACE1Q8IYU2 909 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 PANK4Q9NVE7 773 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 NRBP1Q9UHY1 535 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 ADCY8P40145 1251 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 SATB1Q01826 763 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 KIAA0825Q8IV33 1275 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 N4BP2L2Q92802 583 aaPredicted RBP13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 RPGRIP1Q96KN7 1286 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 LOC102724428A0A0B4J2F2 783 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 SIK1P57059 783 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 POLR2FP61218 127 aaKnown RBP13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 ANKRD20A3Q5VUR7 823 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 GALNT17Q6IS24 598 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 AFAP1L2Q8N4X5 818 aa13.38□□□□□ -0.27
CCDC144A-204ENST00000360524 NACA2Q9H009 215 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms